Gene RPC_4589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4589 
Symbol 
ID3971888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5122652 
End bp5123494 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content66% 
IMG OID637927700 
Productmalonate decarboxylase gamma subunit 
Protein accessionYP_534430 
Protein GI90426060 
COG category 
COG ID 
TIGRFAM ID[TIGR03134] malonate decarboxylase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGCA GTAGCGAAAT GACCGATCCC CTGAACAATC GCGGCCGCAA GTGGTTCGAA 
GCCCTCACGG GTAGCAACGG CAAGGTCGAC GGCAATCCCG GCTCGCTGAT GGTGGCCGAG
GCCGTGCTCG GCGGCGAGAA GGCGGTGTTC GTCGGCGTGG CGCCCGACGC CAATGCCCGC
TTTCCGCGCA CCGGCCACAC CGAGGTCGGG CTGGAAGAAG GCTGGTACGG CACCAAGAAC
CTGCGCGCCG TGATCGAAGC CGACAAGAAC GGCACCAAAC GTCCGATCAT CACGGTGTGC
GATACCAAGA GCCAGGCCTA CGGCCGTCGC GAGGAGCTGT TCGGCATCCA CGTCGCCGCC
GCCGCGATCA TCGCCGCTTA CGCCGATGCC CGCACGGCCG GTCATCCGGT GATCGCGTTG
ATCGTCGGGC GTTGCGTGTC CGGGGCGTTC CTGGCGCTCG CCGGCCAGGC CAACCGGATG
ATCGCGTTCG ACGATCCGGA AGTGCTGATC CACGCGATGT ACAAGGACGC CGCCGCGCGC
ATCACCAAGC GCAGCGTCGC CGAACTCGAC AAGCTCGGCG AGACCATCGT GCCGATGGCC
TACGATATCG GCTCGTTCAA CAAGCTCGGC GGTCTGCACA AGCTGCTGAA GATCGCCGGT
CCGGACACCC CGACGCCGGC GACCATCGAT CAGGTGAAGT CGACCTTGAT CGAAGCCATC
GCGGATGCCC GCAAGTCGTC GCGCACCCTC GACGTGCGGC TCGAATCCGA TGGCGCCAAG
GCGTTCCGCA AGGCCTCGAT CAAAGTCCGC AAGATGATGA CCGAGCAGTG GGCGGCCTGC
TGA
 
Protein sequence
MEGSSEMTDP LNNRGRKWFE ALTGSNGKVD GNPGSLMVAE AVLGGEKAVF VGVAPDANAR 
FPRTGHTEVG LEEGWYGTKN LRAVIEADKN GTKRPIITVC DTKSQAYGRR EELFGIHVAA
AAIIAAYADA RTAGHPVIAL IVGRCVSGAF LALAGQANRM IAFDDPEVLI HAMYKDAAAR
ITKRSVAELD KLGETIVPMA YDIGSFNKLG GLHKLLKIAG PDTPTPATID QVKSTLIEAI
ADARKSSRTL DVRLESDGAK AFRKASIKVR KMMTEQWAAC