| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4571 |
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| Symbol | |
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| ID | 3971793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5100800 |
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| End bp | 5102338 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927682 |
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| Product | hydrogenase 4 subunit F |
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| Protein accession | YP_534412 |
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| Protein GI | 90426042 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCCT CGGACCTGCC TCCCCTCCTG CTGATCTCCC CTCTGGTCGC CGCGATGCTG
ATCTTCGCGA TGCCCATCAG CGGACGAACT GCCAGGCGTA TCGAACTGCT GCACCTTGCC
TCGCTCGTCG TCGTGTTGGT GCTGGCTCTT ATGACCGTCG GTCATGTGTT GTCGTCCGGC
AACCTGATGG CGTTCGGCGA CTGGCTGATG GTCGATCCGT TGGCCGCGAT CTTCGTCGGT
CTGATCGGCG TCGTCGGCTG CCTCACCGGA TTTTACTCGA TCGGTTATAT CCGGCACGAC
GTCGCGCACG GCGAACTGAC GCCGTGGAAG CAAAAGCTGT ATTACGGCTT CTTCAACCTG
TTCCTGTTCA CCATGCTGCT GGTGGTCACC GCCAACAACA TCGTGATGAT GTGGGTCGGG
ATCGAAGCGA CGACCTTGGG GTCGGCGTTC CTGGTCGGCA TCTACGGCAA GGGCACCTCG
CTGGAAGCCG CCTGGAAATA CCTGATCATC TGCTCGGTCG GTGTCGCCTT CGGCCTCTAC
GGCACGGTGT TGACCTTCGC CAATGCCGCG GCCTCGATCG ATCCGCACCA GGCCGTGCTG
TGGACCAGCA TCATGGCCCA CGCCCAGGAG CTCGATCCGA CGCTGATCAA GATCGCCTTC
GTGTTCGTGC TGATCGGCTT CGGCACCAAG GCCGGCATCT TCCCGATGCA CGCCTGGCTG
CCCGACGCGC ATTCCGAAGC GCCGAGCCCG GTTTCGGGTC TGCTGTCCGG CGTGTTGCTG
AAGTGCGGTC TGTTCGTCAT CATTCGTTAC TACGCCGTCA CCATCAAGGC GATCGGCCCG
GAGTTTCCGC AGTCGATGCT GCTGGTGCTC GGCGTGCTGA CGGTGGCGAT CTCGGCCTTC
CTGGTGTTCG TCCAGCACGA CTTCAAGCGC AAGCTCGCCT ACCACTCGAT CGAGCACGTC
GGCCTGATCG TGATCGGTCT CGGCGTCGGC GGCCCGCTCG GCATCGCCGC GGCGCTGCTG
CACACCATCA ACCACAGCTT CACCAAGGCG CTGCTGTTCT GCGGCTCGGG CAACGTACTG
CAGAAATACG GCACCCGCGA TCTGCGCTCA GTGAAGGGCA TCCTGCGCAC CGCGCCGGTG
ACCGGGCTGT TCATCATGGC GGGTGCGCTC GCGCTGGCCG GCTTCCCGCC GTTCAACGTG
TTCGTCTCGG AGTTCATGGT GTTCGCCGCC GGCCTCGACG CCGGATATCC GAAGCTGATG
ATCCTGGTCG CGCTGCTGTT CACCATCACG GTTGCGGCGC TGGTCGACAT CATCGCGCAT
TCGGTGCTCG GCAAGGCGCC CGAGAACATG GAGAAGAGCG ACTCCAGCTG GCTGTCGCTG
GCGCCGATGG GGGTGCTGCT GGCGCTCATC ATGGTGTTCG GCGTCGCGAT GCCTCGCCCG
GTCGGCGAGA TCCTGCGCCA GGCCACCGGC ATCGTCATGG ATCAAGGACA TGCGACGGCG
ACCGCCACGC CGATCGAACA CGTCGCGGCG AAGAAATAG
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| Protein sequence | MVASDLPPLL LISPLVAAML IFAMPISGRT ARRIELLHLA SLVVVLVLAL MTVGHVLSSG
NLMAFGDWLM VDPLAAIFVG LIGVVGCLTG FYSIGYIRHD VAHGELTPWK QKLYYGFFNL
FLFTMLLVVT ANNIVMMWVG IEATTLGSAF LVGIYGKGTS LEAAWKYLII CSVGVAFGLY
GTVLTFANAA ASIDPHQAVL WTSIMAHAQE LDPTLIKIAF VFVLIGFGTK AGIFPMHAWL
PDAHSEAPSP VSGLLSGVLL KCGLFVIIRY YAVTIKAIGP EFPQSMLLVL GVLTVAISAF
LVFVQHDFKR KLAYHSIEHV GLIVIGLGVG GPLGIAAALL HTINHSFTKA LLFCGSGNVL
QKYGTRDLRS VKGILRTAPV TGLFIMAGAL ALAGFPPFNV FVSEFMVFAA GLDAGYPKLM
ILVALLFTIT VAALVDIIAH SVLGKAPENM EKSDSSWLSL APMGVLLALI MVFGVAMPRP
VGEILRQATG IVMDQGHATA TATPIEHVAA KK
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