| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4570 |
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| Symbol | |
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| ID | 3971792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5099059 |
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| End bp | 5100774 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927681 |
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| Product | NADH dehydrogenase (ubiquinone), 30 kDa subunit |
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| Protein accession | YP_534411 |
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| Protein GI | 90426041 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit
[COG3261] Ni,Fe-hydrogenase III large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA ATGTAGCAGA CCGGGTCGGC GCCTCGCATA TCGAATATTT GCGCCAGAAG
TTGCCGCATG CCGTGCTCGA AGAGCGCTGG CAGACGGACA AGCAGGTCAC CGTCACCGTC
AAGCTGAACC AACTCCCCGA GGCCGTCTCG ACGCTGTATT ACGGGCGCGA AGGCTGGCTC
TCGGTGGTGG TCGGCAACGA CGAGCGTTCG CTCAACGACA GCTTCGGCCT GTACTACGTG
CTGTCGATGG AAGGCGAGGA GAAGTGCCAC GTCGTCGTCC ACGCCGCGGT GCCGAGCGAC
AACGAGGAAT TCCCCTCGGT GACGCCGAAG GTTCCGGGCT GCGTCTGGGG CGAGCGCGAA
ATCCGCGACA TGTACGGCCT GCGCCCGGTC GGTCTGCCGG ACGAGCGCCG CCTGGTGCTG
CCGGACGATT GGCCGGACGG GTTGCACCCG CTGCGCAAGG ACTCGATGGA CTATCGGCTG
CGTCCGCCGC CGACCAGCGA CAAAGAGAAC TACCAGTTCC GCAACGACGC GGCCGGCGAG
ACCACCGTGG TGCCGCTCGG GCCGTTGCAC ATCACCTCGG ACGAACCCGG CCATTTCCGG
CTGTTCGTCG ACGGTGAAGA CATCGTCGAC GCCGACTACC GGATGTTCTA CGTGCATCGC
GGCATGGAGA AGCTCGCCGA AACCCGGATG GGCTACAACG AGGTGACGTT CCTCGCCGAC
CGGGTCTGCG GCATTTGCGG CTACGCCCAC TCGGTGGCCT ATGCCAACTC CGTCGAAAAC
GCGCTCGGCA TCATCGTGCC GCAGCGCGCC CAGGCGATCC GCTCGCTGCT GCTGGAAACC
GAGCGGTTGC ACAGCCACAT GCTGAACCTC GGCCTGGTCT GCCATTTCGT CGGCTTCGAC
TCCGGCTTCA TGCAGTTCTT CCGGGTCCGC GAAAAGGCGA TGACGCTGGC GGAGATGCTG
ACCGGCGCCC GCAAGACCTA TGCGATCAAC CTGATCGGTG GCGTGCGCCG CGATATCCTC
GGCGAGCAGC GCACCCGCAC CCTGCAATTG GTCGGCGAAC TGCGCGAAGA AGTGCAGCGG
CTGTTGGAAA TGCTGTTGGC GACGCCGAAC TTCGGCCCGC GCGTGGCCGG CGTCGGCCTG
CTCGATCGCA AGATCGCGCG CGATTATTCG CCGGTCGGTC CGTTGGTGCG CGGCAGCGGC
TTTAAACGCG ACACCCGCGT CGACCACGCC TTCGCCGGCT ATAAGAACGT CAAGCTCGGC
GTTCACACCG GCGACGGCTG CGACGTGCTG TCGCGAACCA TGGTTCGTGC CGCCGAGATC
TTCGACAGCC TCTCGCTGAT CGAGCAGTTG CTCGAAGGCA CCCCGGAAGG CCCGATCATC
AACGAGGACT TCACCTACAA GCCCCACCAG TTCGCGCTCG GCTTCACCGA AGCCCCCCGC
GGCGAGGACA TCCACTGGTC GATGACCGGC GACAACCAGA AGCTCTATCG CTGGCGCTGC
CGGGCCTCGA CCTACGCCAA CTGGCCGGTG CTTCGCTACA TGCTGCGCGG CAACACGGTG
TCCGATGCGC CACTCATCGT AGGTTCGATC GACCCTTGCT ACTCCTGCAC CGACCGCGTC
ACCGTGGTCG ATGTCAAGAA GGAGACCAGC AAGACGATTC CCTACAAGGA AATGGAACGC
TATTGCCGCG AGCGCAAAGA CTCGCCGTTG AAGTAG
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| Protein sequence | MNINVADRVG ASHIEYLRQK LPHAVLEERW QTDKQVTVTV KLNQLPEAVS TLYYGREGWL
SVVVGNDERS LNDSFGLYYV LSMEGEEKCH VVVHAAVPSD NEEFPSVTPK VPGCVWGERE
IRDMYGLRPV GLPDERRLVL PDDWPDGLHP LRKDSMDYRL RPPPTSDKEN YQFRNDAAGE
TTVVPLGPLH ITSDEPGHFR LFVDGEDIVD ADYRMFYVHR GMEKLAETRM GYNEVTFLAD
RVCGICGYAH SVAYANSVEN ALGIIVPQRA QAIRSLLLET ERLHSHMLNL GLVCHFVGFD
SGFMQFFRVR EKAMTLAEML TGARKTYAIN LIGGVRRDIL GEQRTRTLQL VGELREEVQR
LLEMLLATPN FGPRVAGVGL LDRKIARDYS PVGPLVRGSG FKRDTRVDHA FAGYKNVKLG
VHTGDGCDVL SRTMVRAAEI FDSLSLIEQL LEGTPEGPII NEDFTYKPHQ FALGFTEAPR
GEDIHWSMTG DNQKLYRWRC RASTYANWPV LRYMLRGNTV SDAPLIVGSI DPCYSCTDRV
TVVDVKKETS KTIPYKEMER YCRERKDSPL K
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