Gene RPC_4541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4541 
Symbol 
ID3971821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5070962 
End bp5071390 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content64% 
IMG OID637927652 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_534382 
Protein GI90426012 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02803] TonB system transport protein ExbD, group 1 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGAC AGCTTCAGAC CGCATCTGCC GACGACGAGA TGCAGCAGCT CAGCGAAATC 
AACGTCACGC CGTTCATCGA CGTGATCCTG GTGCTGTTGA TCATCTTCAT GATCGCAGCC
CCGCTCGCCA CCGTCGATAT CGCCGTGGAT CTTCCTGCCT CGACGATGAA GCGGCAGCCG
CGGCCGGAGA AGCCGATCTT CGTCACCATG AAGGCGGATC GCTCATTGGC GGTCGGCGAA
AATCCGCTGT CGCGCGACAG CCTCGCGGCG GCGCTCGATC AGGTGACGTC GTCGGACCGC
ACCAAGCGGC TGTTCGTGCG CGCCGACAAG ACCATCCCCT ATGGCGACGT GATGACGCTG
ATGAACGATC TGCGCGGCGC CGGCTATCTG AAGATCGCGC TGGTCGGGCT GGAGAGCGCC
ACGCCATGA
 
Protein sequence
MAGQLQTASA DDEMQQLSEI NVTPFIDVIL VLLIIFMIAA PLATVDIAVD LPASTMKRQP 
RPEKPIFVTM KADRSLAVGE NPLSRDSLAA ALDQVTSSDR TKRLFVRADK TIPYGDVMTL
MNDLRGAGYL KIALVGLESA TP