Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4541 |
Symbol | |
ID | 3971821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5070962 |
End bp | 5071390 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637927652 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_534382 |
Protein GI | 90426012 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGGAC AGCTTCAGAC CGCATCTGCC GACGACGAGA TGCAGCAGCT CAGCGAAATC AACGTCACGC CGTTCATCGA CGTGATCCTG GTGCTGTTGA TCATCTTCAT GATCGCAGCC CCGCTCGCCA CCGTCGATAT CGCCGTGGAT CTTCCTGCCT CGACGATGAA GCGGCAGCCG CGGCCGGAGA AGCCGATCTT CGTCACCATG AAGGCGGATC GCTCATTGGC GGTCGGCGAA AATCCGCTGT CGCGCGACAG CCTCGCGGCG GCGCTCGATC AGGTGACGTC GTCGGACCGC ACCAAGCGGC TGTTCGTGCG CGCCGACAAG ACCATCCCCT ATGGCGACGT GATGACGCTG ATGAACGATC TGCGCGGCGC CGGCTATCTG AAGATCGCGC TGGTCGGGCT GGAGAGCGCC ACGCCATGA
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Protein sequence | MAGQLQTASA DDEMQQLSEI NVTPFIDVIL VLLIIFMIAA PLATVDIAVD LPASTMKRQP RPEKPIFVTM KADRSLAVGE NPLSRDSLAA ALDQVTSSDR TKRLFVRADK TIPYGDVMTL MNDLRGAGYL KIALVGLESA TP
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