| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4524 |
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| Symbol | |
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| ID | 3972073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5049706 |
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| End bp | 5050542 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637927635 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_534365 |
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| Protein GI | 90425995 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.278417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAG ATCTCGCCCA AAAAGACCTC GCGCAGCAAG AGCCCGCCGC GCAGGCGCGT
TCGCAGGACA ATGTCGACGC GCTGCGGTTC GATCCGGTGC CGTATTCGCT GCTGCCGCAG
CTGTCGGACT GCGCGATCCT GCTCGACATC GACGGCACGC TGCTCGATCT TGCGCCGACG
CCGCGCGAAG TCTGGGTTCC GCCGGGGCTC GAAGCGACGC TCACCGGGCT GAAAGCGCGC
ACCGGCGGCG CGATGGCGCT GGTCAGCGGC CGCTCCCTGA ACGACATCGA TCTGATTTTT
GCGCCGGTGC GGTTTCCCGC GGTCGGCGGC CACGGCGCCG AGATGCGGCT GACCGGGGAC
GGCGATCTGG TGGCAGTGCA GGCGCCGCCG TTGGATAAGG ATCTCAAAGG CCGGCTCGCC
GCGATCGCCA AGCTCAGCCC CGGCATTCTC CTGGAAGACA AGGGTTACTC GCTGGCGCTG
CATTATCGGC TGGCGCCGCA TGCCGAGCAG GCGATCTACG AGGCGGTGGC GCTGATCCGT
GCCGAACTGC CGAGCGCGCC GATCGAGGTG CTGCCCGGCA AATCGGTGTG CGAGATCAAA
CACGCCGGTT TCACCAAGGC GACCGGCGTG CTGGAACTGA TGCAGCACGC CCCCTTCAAG
GGCCGCCACC CGGTGTTCAT CGGCGACGAC GTCACCGACG AAACCGTGTT CAACATCATG
CCCGATCTCG GCGGCCTGGC ATTCTCGGTC GGCCGCCACA GCCGCGGCGT CGCCGGGCAT
TTCGAGCAGC CGCGCGACGT GCGGGCCTGG CTCGCCGGCC TGTTGGGAGC GTCATAG
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| Protein sequence | MKQDLAQKDL AQQEPAAQAR SQDNVDALRF DPVPYSLLPQ LSDCAILLDI DGTLLDLAPT
PREVWVPPGL EATLTGLKAR TGGAMALVSG RSLNDIDLIF APVRFPAVGG HGAEMRLTGD
GDLVAVQAPP LDKDLKGRLA AIAKLSPGIL LEDKGYSLAL HYRLAPHAEQ AIYEAVALIR
AELPSAPIEV LPGKSVCEIK HAGFTKATGV LELMQHAPFK GRHPVFIGDD VTDETVFNIM
PDLGGLAFSV GRHSRGVAGH FEQPRDVRAW LAGLLGAS
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