| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4523 |
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| Symbol | |
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| ID | 3972072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5048064 |
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| End bp | 5049533 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927634 |
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| Product | Alpha,alpha-trehalose-phosphate synthase |
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| Protein accession | YP_534364 |
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| Protein GI | 90425994 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.301434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCTCA TCGTCGTTTC GAATCGGGTA GCGCGCGCTG CGGCCAACGA GCCGATGACC
GGCGGGCTGG CCGCGGCGCT GCTTCCAGTC GTTGAAAAAT CCGGCGCGAT CTGGGTCGGT
TCCAGCGGGC GGGTGCGGGA CGGCGCCCAC AAGGATCCCT TCGCCGAGGT CGAAGCGCTC
GGCACCGGCG CCCTCGCCAT GGTCGATCTG CCGTCGGCGC ATTACGCCGG TTATTACGAG
GGCTTCGCCA ATTCGGCGCT GTGGCCGGCG CTGCATTCCA GGCTCGATCT GGTCCGCGTG
ACGCAGGACG ATTACCAATC CTATCGCGAA GTGAACGCCT TCATGGCCCG CGCGCTGCTC
CGGTTCCGCA AACCGGACGC GGCGTTCTGG GTGCAGGATT ATCACTTCCT GGCGCTCGGC
GCCGAACTGC GCGACCTCGG CGTCACCGAG CCGATCGGTT TTTTTCTGCA TACGCCATGG
CCCGCCGCCA CCATCATGAG CGGCGTGCCG CACCACCGCG AACTGATCGA AGCCATGCTG
GCCTACGATC TGCTCGGCTT TCAGACCGAG GACGATCTCG ACAATTTCAT CGGCTATGTC
GGCACCGAAC TCGGGCTTGA CGTCACCGGC CGCGCCATCA CCTCGAGCAA CGGCACCACG
CGCTGCGGCG TGTTCCCGAT CGGCATCGAC GTCGACAAAT TCGCCCAGCA GGCCGCCAAG
GCGGCGTCGC ATCCCGACGT CTCGCGGCTG CGCAAGAGCC TGAACGGCGA GAAGCTGATC
ATCGGGGTCG ACCGGCTGGA CTACTCCAAA GGCCTGGTCA ACCGCGTCAC CGCGTTCGAC
AAGATGCTGA CCAGCCATCC GGCGATGCTG CGTGCGGTGT CGCTGCTGCA GATCGCCACC
CCGTCGCGCG GCACCATCGA AGCCTATGGC ACGTTGCAAA GCGAACTCGC CCGGCTGGTC
AGCGATGTCA ACGGCCGCCA CGGCGAGGTC GATTGGACCC CGATCCGCTA TCTCAACAAG
GGCTTCAATC AGACCGTGCT GGCCGGCCTC TATCGCACCG CGCAGGTCGG CCTGGTGACC
CCGATGCAGG ACGGCATGAA TCTGGTCGCC AAGGAATACG TCGCGGCGCA GAACCCGGGC
GATCCCGGCG TGCTGGTGCT GTCGAAATTC GCCGGCGCCG CCGACGAACT CGACACCGCG
CTGCAGGTCA ACCCGCACGA CGTCGAAGGC ATGGCCCGGG CGCTGGCGAC GGCGCTGTCG
ATGCCGCTGA TCGAACGGCG GATGCGCTGG GAAGCGATGA TGGAGAAGCT GCGCACCGGC
TCGATCCACA ACTGGTTCGC GGACTTCCTC GCCGCCTTGC AGAGTTCGCA TGCCGTCAAC
GAACAGGCCG GCCGGGCGAT CGAAGTGGTT GACCCGGATC TATGGCCGGT GCGCTCGATC
GGCGGTCACG ACATCATCCG CTATCATTAG
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| Protein sequence | MKLIVVSNRV ARAAANEPMT GGLAAALLPV VEKSGAIWVG SSGRVRDGAH KDPFAEVEAL
GTGALAMVDL PSAHYAGYYE GFANSALWPA LHSRLDLVRV TQDDYQSYRE VNAFMARALL
RFRKPDAAFW VQDYHFLALG AELRDLGVTE PIGFFLHTPW PAATIMSGVP HHRELIEAML
AYDLLGFQTE DDLDNFIGYV GTELGLDVTG RAITSSNGTT RCGVFPIGID VDKFAQQAAK
AASHPDVSRL RKSLNGEKLI IGVDRLDYSK GLVNRVTAFD KMLTSHPAML RAVSLLQIAT
PSRGTIEAYG TLQSELARLV SDVNGRHGEV DWTPIRYLNK GFNQTVLAGL YRTAQVGLVT
PMQDGMNLVA KEYVAAQNPG DPGVLVLSKF AGAADELDTA LQVNPHDVEG MARALATALS
MPLIERRMRW EAMMEKLRTG SIHNWFADFL AALQSSHAVN EQAGRAIEVV DPDLWPVRSI
GGHDIIRYH
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