Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4521 |
Symbol | |
ID | 3972299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5045928 |
End bp | 5046143 |
Gene Length | 216 bp |
Protein Length | 71 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637927631 |
Product | phage transcriptional regulator, AlpA |
Protein accession | YP_534362 |
Protein GI | 90425992 |
COG category | [K] Transcription |
COG ID | [COG3311] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.243833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAAC CAGATCGTAT CATCCGCCTG AAAACCGTTC TGTCCCGGAC CGGCCTGTCC CGGTCCACCA TCTACCGCAA GATCACCGAG GGGACATTCC CGGCCCAGAT CAGGATCAGC GTCAACGGCG CAGGCTGGCG GGAATCCGAC ATCAACCGAT GGATCGCAGA CCCCGTGGCG TGGCGGCCGA AACACGAGTT CGACGATGCC CGGTGA
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Protein sequence | MPEPDRIIRL KTVLSRTGLS RSTIYRKITE GTFPAQIRIS VNGAGWRESD INRWIADPVA WRPKHEFDDA R
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