| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4493 |
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| Symbol | |
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| ID | 3972408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5006203 |
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| End bp | 5007105 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927604 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_534335 |
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| Protein GI | 90425965 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.166702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGCGG TTTGCGGTTG CGGTCAGGGG ACCGTCGAAG GACAGCCTCT TCACGACCAT
GACGACCTCG ACGAGGCCGC GCACGCCGCG CTGCATGCCG CCGGCACGCC GCATGGCCAT
CATCACGAAC ATCCGCACGA CCATCATCAT GCCGATCACG ATCATCACGA TCATGCGGCC
GTGCATTACG GCGTCGGCGA AGCCGGGGTC TCGGTGCCGG GATTGGACCA GCGCCAGATC
ATCAAGCTGG AGCGCGCGGT GCTGGCGCAC AATGACGGTC TTGCCGAAGC CAATCGCGCG
CGCTTTGCGC AGGCCGGAAT TCTCACGCTG AACTTGCTGT CGAGCCCAGG CTCCGGCAAG
ACTACGCTGC TCTGCGCCAC GATCACCGCG CTGGCCGGCC GATTGCCGGT GGCGGTGATC
GAAGGCGATC AGCAGACCAG CTTCGACGCC GACCGGATTC GCGAATCCGG CGCGCCGGCG
ATCCAGGTCA ACACCGGCAA AGGTTGCCAT CTCGACGCCG CGATGGTGGC CGACGCCTTC
GCGCGGCTCG ATCTGGCCGC GGGTGGCGTG TTGTTCGTGG AGAACGTCGG CAATCTGGTC
TGCCCTGCCG CCTTCGATCT CGGCGAGGCT GCCAAGGTGG TGATCCTCTC GGTCACCGAG
GGCGAGGACA AGCCGCTCAA ATATCCCGAC ATGTTCGCCG CCGCCGACCT GATGATCCTG
AACAAGATCG ATCTGGCGCC CTATGTCAGC TTCAATGTCG AACGCTGTCT GGAACTGGCG
CACCGGGTCA ACCCCCGCCT GTCGGTGCTG CAGCTGTCCG CCACCACCGG CGAGGGACTT
GCGGCCTGGG TGCAATGGAT CGAAGCCCGG CAGCGCGCCA TCGCAGCGAG CGTCGCGTCA
TAG
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| Protein sequence | MCAVCGCGQG TVEGQPLHDH DDLDEAAHAA LHAAGTPHGH HHEHPHDHHH ADHDHHDHAA
VHYGVGEAGV SVPGLDQRQI IKLERAVLAH NDGLAEANRA RFAQAGILTL NLLSSPGSGK
TTLLCATITA LAGRLPVAVI EGDQQTSFDA DRIRESGAPA IQVNTGKGCH LDAAMVADAF
ARLDLAAGGV LFVENVGNLV CPAAFDLGEA AKVVILSVTE GEDKPLKYPD MFAAADLMIL
NKIDLAPYVS FNVERCLELA HRVNPRLSVL QLSATTGEGL AAWVQWIEAR QRAIAASVAS
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