| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4484 |
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| Symbol | |
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| ID | 3972496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4992339 |
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| End bp | 4994519 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927595 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_534326 |
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| Protein GI | 90425956 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.429644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.265878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCCG TCTCATCACG GCTGCGCCGC GCTCTGCTGG CATCCGCGGC CACGCTCGTC
ACCGGCGCAG CGTCGGCGCA ATCAGCTTCA ACGTCGCTGC CAACCATCAC GGTGGAGTCC
GCGGCGCCGC AGCGCACGGT CAGCGCGCGC AAACCGCGGC AAGTCACGGG CGGCGGCCGC
TCGGCACGCC AAGTCACACC AGCGGCGCCG TCGCCCAATT CGGCGGGGCA GGGAACGCGC
GCGCCTGGCT CTCTCACGGT TCCGACCGCG CAGCAGGCGC TGAAAGAAAT CGATCGGACT
CCGGGCGCGG TCGCCGTGGT GCCCGATACG GCGTTCAAGA ACGGCCCGGC CAACACCGTG
AAGGACATCC TCGGCTGGGT GCCGGGGGTG TTGATTCAGA CCCGATGGGG GCCAGACGGC
CGGGTATCGA TCCGCGGCTC GGGTCTGTCC AGGAACTACG GCAATCGCGG CATCAACATC
TTCATGGACG GTCTGCCGCT CAACACCTCG GACGGGCTGT TCGACCTGTT CGAGGTGGAT
CCCAGCGTCT ATCGCTACGT CGAAGTGTTC AAGGGCGCCA ACGCGCTGCG CTATGGCGCC
AATTCGCTCG GCGGCGCGAT CAATTTCGTG ATGCCGACGG GACGCGACGC GCCGGCGTTC
GACGCGCGTG TCGATGGCGG CAGCTTCGGC TATGTCAAGA CCCAGAGCAG CATCGCCGGC
GTCAATGGCC CGGCCGACTA TTTCATCACC GCCTCGGCGC AGCGCGAGGA CGGCTACCGC
GAGCACAGCC GAACCGATAC CGAGCGGCTC AACGCCAATT TCGGCTATCA ATTTTCTCCC
GATGCCGAGA CGCGGTTTTA TCTGAACGCC GGGCGGTGGC GGGCGGAGTT GCCGGGCGAA
GTGACCAAGC AGGCGGCGCT GAACTCGCCG CGCGCCGCCG ACAGCGAATT CCTGCGGCAG
GATCAGCAGC GCAATATCGA CACGGTCCGG ATCGCCAACA AGACCACGCT CAGGTTCGAC
GACACCACCG TGGATCTCGG CGTCTTCGGC CTCGCCCGCC ACGTGATGCA TCCGATCTAT
CAATGGCTGG ACTTCACCGC GCAAGACTAT GGCGGCTTCG TGCGCGCCAC CGACGAACGC
TCGCTCGGCG GCTTGCGCAA CCGGCTGACC GCTGGCGTCA ACGTGCTCAA CGGCACCATT
GATATCAACC AGTATCAAAA CCTCACCGGC GCGGTGAAGG GCGCGCTGGC GTCGTCCAAC
CTGTGGAAAT CCGACAACGT GACCGCCTAT GCGGAGAACT CGCTCTATGT GCTGCCGAAC
GTCGCCTTGA TCGCCGGCGC CCAGTTCCTC CACGCCTCGC GCGAACAGCA GGACCGTTTC
CTGTCCGACG GCAATCAGTC CGGCACCCGA AACTGGGACC TGGTCAGTCC GAAGGTCGGC
GTGCTGTGGG ACGTCGATCC GACATGGCAG GTGTACGGCA ACATCTCGCG CAACGCCGAG
GTGCCGACCT TCGACGTCAA CAGCTTCTCG TCGCCAGCGA GTTCGAACGT CGAGGCGCAG
ACCGGCACCA CCTACGAGAT CGGCACGCGC GGCCGCCGGC CGGACGTCAC CTGGGACCTG
TCGGCGTATC GCACCGATCT GCGCAACGAG TTTCAGTGCC TGACCACGTC GCCGTTCAGT
CCCTGCACCG TGGTCAATGC CGACCGCACC GTGCATCAGG GCGTCGAAGC CGGCCTCGGC
GTGGCGTTGC TGAAATCCAG TTTCGCGCAG GATGACCGCT TCTGGTTCAA CGTCGCCTAC
ACCTACAGCG ACTTCCGCTT CGACCGCGAC GCGACCTGGG GCAACAACCG GCTGCCGGGT
CTGCCGCCGC ACTACCTCCG CGCGGAAATT CTCTACAAGC ATCAGAACGG CTTCTATGCC
GGCCCGAACG TCGAATGGAT GCCGCAGGCG TTCTTCGCCG ACAACGCCAA CAGCCTGACC
ATCGACCCCT ACGCGCTGTT GAACTTCAAG GTCGGCTACG ACCACGGCAT CGGCTGGTCG
GGCTATGTCG AAGGGCGGAA CCTGCTCGAC ACCCGCTACA TCTCCAGCAC CATCACCGCC
GGCGTGGCGA CGGCGACGTC GGCGTTGTTC AACCCAGGCA TGGGGCGCGC GATCTATGGC
GGCATCCGCT ATCGGATGTG A
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| Protein sequence | MRSVSSRLRR ALLASAATLV TGAASAQSAS TSLPTITVES AAPQRTVSAR KPRQVTGGGR
SARQVTPAAP SPNSAGQGTR APGSLTVPTA QQALKEIDRT PGAVAVVPDT AFKNGPANTV
KDILGWVPGV LIQTRWGPDG RVSIRGSGLS RNYGNRGINI FMDGLPLNTS DGLFDLFEVD
PSVYRYVEVF KGANALRYGA NSLGGAINFV MPTGRDAPAF DARVDGGSFG YVKTQSSIAG
VNGPADYFIT ASAQREDGYR EHSRTDTERL NANFGYQFSP DAETRFYLNA GRWRAELPGE
VTKQAALNSP RAADSEFLRQ DQQRNIDTVR IANKTTLRFD DTTVDLGVFG LARHVMHPIY
QWLDFTAQDY GGFVRATDER SLGGLRNRLT AGVNVLNGTI DINQYQNLTG AVKGALASSN
LWKSDNVTAY AENSLYVLPN VALIAGAQFL HASREQQDRF LSDGNQSGTR NWDLVSPKVG
VLWDVDPTWQ VYGNISRNAE VPTFDVNSFS SPASSNVEAQ TGTTYEIGTR GRRPDVTWDL
SAYRTDLRNE FQCLTTSPFS PCTVVNADRT VHQGVEAGLG VALLKSSFAQ DDRFWFNVAY
TYSDFRFDRD ATWGNNRLPG LPPHYLRAEI LYKHQNGFYA GPNVEWMPQA FFADNANSLT
IDPYALLNFK VGYDHGIGWS GYVEGRNLLD TRYISSTITA GVATATSALF NPGMGRAIYG
GIRYRM
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