Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4463 |
Symbol | nifH |
ID | 3973089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4969184 |
End bp | 4970086 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637927574 |
Product | nitrogenase reductase |
Protein accession | YP_534305 |
Protein GI | 90425935 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCAC TTCGGCAAAT CGCGTTCTAC GGCAAGGGCG GCATCGGCAA GTCCACCACT TCACAGAACA CGCTCGCGGC ACTGGTCGAG ATGGGTCAGA AGATTCTGAT CGTCGGCTGC GACCCCAAGG CGGACTCCAC CCGTCTGATC CTCAACACCA AGATGCAGGA CACCGTGCTC AGCCTCGCCG CTGAAGCCGG CTCGGTGGAA GACCTCGAAC TCGAAGACGT GATGAAGATC GGCTACAAGG GCATCAAGTG CACCGAAGCC GGCGGCCCGG AGCCCGGCGT CGGTTGCGCC GGCCGCGGCG TCATCACCGC GATCAACTTC CTGGAAGAGA ACGGCGCCTA TGAAGACGTC GATTACGTCT CCTACGACGT GCTCGGCGAC GTGGTCTGCG GCGGCTTCGC GATGCCGATC CGCGAGAACA AGGCGCAGGA AATCTACATC GTGATGTCCG GCGAGATGAT GGCGCTGTAC GCCGCCAACA ACATCGCCAA GGGCATTCTG AAGTACGCCT CCTCGGGCGG CGTCCGCCTC GGCGGCCTGA TCTGCAACGA ACGCCAGACC GACCGCGAGC TCGACCTCGC CGAAGCGCTG GCCGCCCGCC TCAACTCCAA GCTGATCCAC TTCGTGCCGC GCGCCAACAT CGTGCAGCAC GCCGAGCTGC GCCGCCAGAC CGTGATCGAA TACGCGCCGG ACAGCCAGCA GGCCAAGGAA TATCGCGCGC TGGCCGAGAA GATCCATGCC AACTCCGGCA AGGGCACCAT CCCGACCCCG ATCACCATGG AAGAGCTGGA AGGCATGCTG CTCGACTTCG GCATCATGAA GACCGACGAG CAGGCGCTCG CCGAACTCGC GGCCAAGGAA GCGGCGAAGG CCGCCGCCGA AGCCACGGCC TGA
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Protein sequence | MAALRQIAFY GKGGIGKSTT SQNTLAALVE MGQKILIVGC DPKADSTRLI LNTKMQDTVL SLAAEAGSVE DLELEDVMKI GYKGIKCTEA GGPEPGVGCA GRGVITAINF LEENGAYEDV DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMALY AANNIAKGIL KYASSGGVRL GGLICNERQT DRELDLAEAL AARLNSKLIH FVPRANIVQH AELRRQTVIE YAPDSQQAKE YRALAEKIHA NSGKGTIPTP ITMEELEGML LDFGIMKTDE QALAELAAKE AAKAAAEATA
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