| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4452 |
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| Symbol | |
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| ID | 3973078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4958915 |
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| End bp | 4959931 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927563 |
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| Product | nitrogen-fixing NifU-like |
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| Protein accession | YP_534294 |
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| Protein GI | 90425924 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0694] Thioredoxin-like proteins and domains
[COG0822] NifU homolog involved in Fe-S cluster formation |
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| TIGRFAM ID | [TIGR02000] Fe-S cluster assembly protein NifU |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGA TGCAGCACGA CAGGTTCGGC GAACATTTTG CCAACCCGCG CAATGTCGGC
GTGCTGGCGC AGGCCAATGC GGTCGGCTCG GTCGGCACCA TGGGGTGGGG CGACGCAGTC
AAGCTGATGC TGCAGATCGA TCCGGTCACC GACCGGATCG AGCAGGCCCG GTTCCAGACC
TTCGGCTGCT CATCGGCGAT CGCCTCGTCC TCGGCGATCA CCGAGCTGAT CACCGGCAAG
ACCACCGACG AGGCGCTGGA GATCTCCGCC GCTGACGTCG TTGAATTCCT CGGCGGGCTA
CCGGCGGAGC GGATGTACTG TTCGGTGATG ACGTACGAAG CCGTACAAAA TGCCATCGCC
GACTATCGCC GGCACGGCGC GCCGGCCCCC GCCACGGACT CCGCGGTGAT CTGCAAATGC
TTCGGCGTCA CCCAGGCGAT GGCCGAGCGC ACCATCCGCA TCAATCATCT CACCGATCCG
CACCAGGTGA CGTTTCATAC CAAGGCCGGC GGCGGCTGTT TCAGTTGCTA CAAGCAGATC
GAAACCGTGC TGGCGCGGGT CAATGCCGAC ATGGTCGCCG AAGGCCATCT TTCGCCGCGG
CAGGCCTACC GGCTGGGCTC GGTGCCGCCG TCGAGCGAAG CATTGAAGCC GCGCGGCGAC
GCGCCGCCTC CCTTGGGCTC CGGCGCCCGC GCCAATATTC CCGGCCATAT CGCGATTCCG
CCGCGCCCGG CGCCGACTTC GGCAGCACCC CGCCCGGTGC TGCCGCCGTC GGAAAATCGC
GACCGCGGCA CGCCCGAACA ATTCGAACTG ATCAAGCAGG CGGTCGAAGC GTTGCGCCCG
CATCTGCAGC GCGACGGCGG CGATTGCGAG CTGGTCGATG TCGACGGCAA CACCATCTAT
CTGCGGCTGT CGGGCAATTG CGTCGATTGT CAGTTGGCGT CGGTGACGCT GTCCGGCGTG
CAGGCGCAGC TCGCCGAGAA GCTGCAGCGC CCGGTGCGCG TGGTGCCGGT GTCATGA
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| Protein sequence | MPTMQHDRFG EHFANPRNVG VLAQANAVGS VGTMGWGDAV KLMLQIDPVT DRIEQARFQT
FGCSSAIASS SAITELITGK TTDEALEISA ADVVEFLGGL PAERMYCSVM TYEAVQNAIA
DYRRHGAPAP ATDSAVICKC FGVTQAMAER TIRINHLTDP HQVTFHTKAG GGCFSCYKQI
ETVLARVNAD MVAEGHLSPR QAYRLGSVPP SSEALKPRGD APPPLGSGAR ANIPGHIAIP
PRPAPTSAAP RPVLPPSENR DRGTPEQFEL IKQAVEALRP HLQRDGGDCE LVDVDGNTIY
LRLSGNCVDC QLASVTLSGV QAQLAEKLQR PVRVVPVS
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