Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4428 |
Symbol | |
ID | 3970371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4935871 |
End bp | 4936911 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637927539 |
Product | 2-keto-3-deoxygluconate permease |
Protein accession | YP_534270 |
Protein GI | 90425900 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00793] 2-keto-3-deoxygluconate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATTC CGATTAAGCG AGCGATCGAG AAAGTGCCCG GCGGGATGAT GACGGTGCCG CTGTTGATCG GCGCGTTGAT CACCACCTTC TTCCCCGGCA CCCCGCAATT CTTCGGCTCC TTCACCGGGG CGCTGTTCTC CGGCGCCCTG ACCATTCTGG CGGTGTTTTA CGTCTGCATG GGCGCCAGCA TCGATTTCCG CTCCACCCCC TACATCGTCA AGAAGGGCGG CACGCTGCTG TTCGTGAAGG TCGGCGTCGC GGTGATCCTC GGCGTGGTGT TCGGCCGCAT TCTCGGCGAG AGCCCGGTCA CCGGCGGCAT GTTCGCCGGG ATTTCGACGC TCGCCATCGT CGCGGCGATG AACGACACCA ATGGCGGCCT CTACATGGCG CTGATGGGCC AATACGGCCG TCCGAAGGAC GTCGGCGCCT ATACCATCAT GACGCTGGAG AGCGGCCCGT TCCTCACCAT GGTGACGCTC GGCGTCGCCG GGCTGTCGGC GTTCCCCTGG CAGACCCTGG TCGGCGCCAT CCTGCCGCTG ATCGTCGGCA TGATCATCGG CAATCTCGAC CGCGAGATGC GCGCGTTTCT CAGCCGCGCC GTGCCGGTGA TGATCCCGTT CTTCGCCTTC GCGCTCGGCA CCGGCCTTGA CCTCACCAAG GTGTGGCAGG CCGGCCTGCT CGGCCTCGGC ATGGGTGTCG CCGTCGTGGT GGTGACCGGC ATTCCGCTGT TCTTCGCCGA TCGTCTCACC GGCGGCACCG GCATCGCCGG CGTTGCCGCG GCCTCGACCG CGGGCAATGC CGCCGCCGTC CCGGCGATCG TCGCCGCGGC CAATCCGGCC TATGCCGACG CCGCGCGGCC CGCGACCATT CTGGTTGCGG CCTGCGTCGT GGTCACCGCG ATCCTGACCC CGATCGTCAC CGCCTGGCTC GCCGGCATTG TCGGCCGCGG CGCCGACGAA CCGGAAGAGG CGTTGGTGGT GGCCGACGAC ATCGCGCCCA CCGCGCCGGT GGCCCCCGTC GCGCCCGTGA CCGGCCGCTG A
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Protein sequence | MQIPIKRAIE KVPGGMMTVP LLIGALITTF FPGTPQFFGS FTGALFSGAL TILAVFYVCM GASIDFRSTP YIVKKGGTLL FVKVGVAVIL GVVFGRILGE SPVTGGMFAG ISTLAIVAAM NDTNGGLYMA LMGQYGRPKD VGAYTIMTLE SGPFLTMVTL GVAGLSAFPW QTLVGAILPL IVGMIIGNLD REMRAFLSRA VPVMIPFFAF ALGTGLDLTK VWQAGLLGLG MGVAVVVVTG IPLFFADRLT GGTGIAGVAA ASTAGNAAAV PAIVAAANPA YADAARPATI LVAACVVVTA ILTPIVTAWL AGIVGRGADE PEEALVVADD IAPTAPVAPV APVTGR
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