Gene RPC_4428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4428 
Symbol 
ID3970371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4935871 
End bp4936911 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content68% 
IMG OID637927539 
Product2-keto-3-deoxygluconate permease 
Protein accessionYP_534270 
Protein GI90425900 
COG category 
COG ID 
TIGRFAM ID[TIGR00793] 2-keto-3-deoxygluconate transporter 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTC CGATTAAGCG AGCGATCGAG AAAGTGCCCG GCGGGATGAT GACGGTGCCG 
CTGTTGATCG GCGCGTTGAT CACCACCTTC TTCCCCGGCA CCCCGCAATT CTTCGGCTCC
TTCACCGGGG CGCTGTTCTC CGGCGCCCTG ACCATTCTGG CGGTGTTTTA CGTCTGCATG
GGCGCCAGCA TCGATTTCCG CTCCACCCCC TACATCGTCA AGAAGGGCGG CACGCTGCTG
TTCGTGAAGG TCGGCGTCGC GGTGATCCTC GGCGTGGTGT TCGGCCGCAT TCTCGGCGAG
AGCCCGGTCA CCGGCGGCAT GTTCGCCGGG ATTTCGACGC TCGCCATCGT CGCGGCGATG
AACGACACCA ATGGCGGCCT CTACATGGCG CTGATGGGCC AATACGGCCG TCCGAAGGAC
GTCGGCGCCT ATACCATCAT GACGCTGGAG AGCGGCCCGT TCCTCACCAT GGTGACGCTC
GGCGTCGCCG GGCTGTCGGC GTTCCCCTGG CAGACCCTGG TCGGCGCCAT CCTGCCGCTG
ATCGTCGGCA TGATCATCGG CAATCTCGAC CGCGAGATGC GCGCGTTTCT CAGCCGCGCC
GTGCCGGTGA TGATCCCGTT CTTCGCCTTC GCGCTCGGCA CCGGCCTTGA CCTCACCAAG
GTGTGGCAGG CCGGCCTGCT CGGCCTCGGC ATGGGTGTCG CCGTCGTGGT GGTGACCGGC
ATTCCGCTGT TCTTCGCCGA TCGTCTCACC GGCGGCACCG GCATCGCCGG CGTTGCCGCG
GCCTCGACCG CGGGCAATGC CGCCGCCGTC CCGGCGATCG TCGCCGCGGC CAATCCGGCC
TATGCCGACG CCGCGCGGCC CGCGACCATT CTGGTTGCGG CCTGCGTCGT GGTCACCGCG
ATCCTGACCC CGATCGTCAC CGCCTGGCTC GCCGGCATTG TCGGCCGCGG CGCCGACGAA
CCGGAAGAGG CGTTGGTGGT GGCCGACGAC ATCGCGCCCA CCGCGCCGGT GGCCCCCGTC
GCGCCCGTGA CCGGCCGCTG A
 
Protein sequence
MQIPIKRAIE KVPGGMMTVP LLIGALITTF FPGTPQFFGS FTGALFSGAL TILAVFYVCM 
GASIDFRSTP YIVKKGGTLL FVKVGVAVIL GVVFGRILGE SPVTGGMFAG ISTLAIVAAM
NDTNGGLYMA LMGQYGRPKD VGAYTIMTLE SGPFLTMVTL GVAGLSAFPW QTLVGAILPL
IVGMIIGNLD REMRAFLSRA VPVMIPFFAF ALGTGLDLTK VWQAGLLGLG MGVAVVVVTG
IPLFFADRLT GGTGIAGVAA ASTAGNAAAV PAIVAAANPA YADAARPATI LVAACVVVTA
ILTPIVTAWL AGIVGRGADE PEEALVVADD IAPTAPVAPV APVTGR