| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4426 |
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| Symbol | pdxA |
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| ID | 3970406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4933614 |
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| End bp | 4934621 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927537 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_534268 |
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| Protein GI | 90425898 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.236068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.573841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCGTC CGACCATTGC GATCACCATG GGCGATCCCG CCGGCATTGG GCCCGAGGTG
ATCATGAAGG CCTTGGCGCA TCCCGACGCG CAGAAGAATT GCAACGCGCT GGTGGTCGGC
GACGCCAACC GGCTGCGCAA GGCCGGCAAG ATCTGCGGGC TGTCGCTGCA GGTCGACGCC
TTGAGCGACG CCAAGGACGC GAATTTTGCC TCGAAGGCGG TGCAGTGCGT CGATCTCAAG
ATCGTCCCTG ACGATCTGCC GTTCGGCAAA ATGTCGCCGG TCGCCGGCGA GGCGGCGTTC
CGCTTCATCG AGAAGGCGGT GCAACTGGTG CAGGCCGGGG TCGCGCAGGG CATCTGCACC
GCGCCGCTCT CCAAGGAAGC GCTGCACGCC GCCGGCCACA AATTCCCCGG CCACACCGAA
ATGCTGGCGC ATCTCACCGG CACCCCCGAA GTCTCGATGA TGCTGGTGTC GCCGAAGCTG
CGGGTGATCC ACGTTACGAC TCATATCGGC CTGATCGACG CCATCGCCAA GATCGAGCCC
GGCCTGGTCG AGCGCGTGAT CACGCGCGGC CACGAGGTGC TGGTCCGCGC CGGCATCAAG
AATCCGAAGA TCGGCGTCTG CGCGATCAAT CCGCACGCCG GCGAGAACGG TCTGTTCGGC
CGCGGCGAGG AAGCCGAGAA GATCACCCCC GCCATCGAAG CCTGTCAGCG CAAGGGCTGG
GACGTCCGCG GCCCGCTGCC GGCCGACACG CTGTTCTTCC TCGCCGGCCG CGGCGACTTC
GACATGGTGG TGGCGATGTA TCACGATCAG GGCCACGGCC CGATCAAGGT GCTGGGGCTG
GAAGCCGGGG TGAACATCAC CGTCGGCCTG CCGGTGATCC GCACCTCGGT CGACCACGGC
ACCGCCTTCG ACATCGCCGG CAAGGGCATC GCCGACGAGC GCAGCCTGAT CGAGGCGCTG
CGCCAGGCGG TCGAGCTGGC GCCGAAGCAG GTCGCCGAGC CGGTCTGA
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| Protein sequence | MTRPTIAITM GDPAGIGPEV IMKALAHPDA QKNCNALVVG DANRLRKAGK ICGLSLQVDA
LSDAKDANFA SKAVQCVDLK IVPDDLPFGK MSPVAGEAAF RFIEKAVQLV QAGVAQGICT
APLSKEALHA AGHKFPGHTE MLAHLTGTPE VSMMLVSPKL RVIHVTTHIG LIDAIAKIEP
GLVERVITRG HEVLVRAGIK NPKIGVCAIN PHAGENGLFG RGEEAEKITP AIEACQRKGW
DVRGPLPADT LFFLAGRGDF DMVVAMYHDQ GHGPIKVLGL EAGVNITVGL PVIRTSVDHG
TAFDIAGKGI ADERSLIEAL RQAVELAPKQ VAEPV
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