| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4394 |
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| Symbol | |
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| ID | 3970409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4897270 |
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| End bp | 4897962 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927503 |
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| Product | OmpW |
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| Protein accession | YP_534236 |
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| Protein GI | 90425866 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.140783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGAAGC TATTGGTTGC GATGTCGGCG CTGATGTTGG CGACGGCGCT GAATGGGGTA
TCGGCGACCG CCGAGGCCGC CGACATGCCG GCGGGCAAGC CGTTCTACAA GGCGCCCGTG
GTCGAGGCGT GGAATCCCTG GATGATCCGG CTGCGCGCGC TCGGCGTCGT GACCCGCGAT
TCCGGCACCG TCAACGGCAT CGCCGGCTCC GACCTCGCCA CCTCCGACGT CGTGGTGCCT
GAGCTCGACA TCTCGTATTT CTTCACCCGC AACATCGCGG CGGAATTGAT CCTCGGCGTC
ACCAAGAACC ACGTCACCGG CGCGGGCTCG CTGGCCGGCG TCGACGTCGG CAAGTCCTGG
CTGCTGCCGC CGACGCTGAC GCTGCAATAT CACTTCACCG ATTTCGGCGC GTTCAAGCCC
TATGTCGGCG CCGGCGTGAA CTACACGTTC TTCTTCAGCC AGTCGGCGGC GGGCGGCACC
GTGACCGACA GCCACCTCAA GGACACCGCG GCGCCGGTGG TGCAGGTCGG CTTCGACTAC
ATGATCAACA ATCATTGGGG CTTCAACGTC GACGTCAAGA AGCTGTGGCT GCGCCCGGAT
TGGAACGGCA CGCTGGCCGG CGGTGTGCCG GTCTCCGGCA AGGTCAACCT CGATCCGTGG
CTGATTGGCA CCGGCATCAC CTACAAGTTC TGA
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| Protein sequence | MRKLLVAMSA LMLATALNGV SATAEAADMP AGKPFYKAPV VEAWNPWMIR LRALGVVTRD
SGTVNGIAGS DLATSDVVVP ELDISYFFTR NIAAELILGV TKNHVTGAGS LAGVDVGKSW
LLPPTLTLQY HFTDFGAFKP YVGAGVNYTF FFSQSAAGGT VTDSHLKDTA APVVQVGFDY
MINNHWGFNV DVKKLWLRPD WNGTLAGGVP VSGKVNLDPW LIGTGITYKF
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