| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4357 |
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| Symbol | |
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| ID | 3970834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4857395 |
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| End bp | 4859176 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927466 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_534199 |
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| Protein GI | 90425829 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0312227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0147446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCAA CTCGACTTCG TCGCTCGATG ATCGCTGCCG TCGCGCTGGC CGCGCTGCCG
CTGTCCAGCC CGGTGCTGGC GCAGACGCCG GATCACCAGA ACGACAGCTC GGTGCCGTTT
CCGACCAGCC GCGATCTGAA ATCGCTGACC ACCGCGGGCA GCTATCTGGC GGCGCGCCAC
GCCAGCGTGC AGCGCGACGC CAGTGCGGCG GCGACCTTCT ATCGCTCGGC GCTGCGCGCC
GATCCGAAGA ACAACGAATT GTTGGATCGC GCCTTTATTT CCTCGCTGGC CGACGGCGAC
ATCGACGAGG CGGTCAAGCT CGCCGATCGC ATTCTGGCAA TCGACAAGAC CAACCGGGTG
GCGCGCCTGG TGGTCGGCAT TCGTGACCTG AAGCAGAAGA AATACGCCGC CGCCCAGCAG
AACATCAATC AATCGGTGCG CGGTCCGATC ACCGATCTGG TCGCGACGCT GATCTCCGGC
TGGGCGAGCT ACGGCGCCGG CGACGTCAGG ACCGCGGTCG GCAATATCGA CAAGCTGGCC
GGTCCGGAAT GGTATCCGAT TTTCAAGGAC CTGCATTCCG GCATGATGCT GGATCTCGCG
GGCAAGCAGA AGGACGCCGG GGTCCGGCTG GAACGCGCCT ACAAGCTCGA CGACTCCGCG
TTGCGGGTGG TCGACGCTTA CGGGCGCTGG CTGTCGCGCA ACAAGGACGA CGCCGCGGCG
AGCGCGGTCT ACGAGGCGTT CGACAAGAAG CTGGCGCGGC ATCCGTTGGT GCTGGAAGGC
ATCCGCGAGA CCAAGGCCGG CAAGAAATTG CCGCCGCTGG TCGATTCGGC GCAGGCCGGC
GCCGCCGAGG CGCTGTACGG CATCGGCGCC TCATTGACCC GGCGCGGCGG CGAGGATCTG
GCGCTGGTCT ATCTGCAGCT CGCTCTGTAC CTGCAGCCGC AGCATTCGCT GGCGCTGTTG
TCGCTCGGCG ATCTCTACGA GTCGGTGAAG AAGCCGCAGA TGGCGATCAA GGCCTACGAG
CGCGTGCCGG CCAATTCGCC GCTGAAGCGC AACGCCCAGA TCCAGCTCGC CACCGATCTC
GACGCCGCCG ACCGCAGCGA GGAGGCGATC AAGATCTTGA AGGACGTCAC CGCCGAAGAT
CCGAAGGATC TCGAGGCGAT CATGGCGCTC GGCAACATCG AGCGCGGCCG CAAGAAGTTC
GCCGATTGCG CGGTGACCTA CTCGCAGGGC ATCGACGTGC TGTCCGGCGC CGAGAAGAAC
AACTGGGTGT ACTACTATTT CCGCGGCATC TGCGAGGAGC GCTCCAAGCA ATGGAGCAAG
GCCGAAGCCG ACATGAAGAA GGCGCTCGAG CTGCAGCCGG AGCAGCCGCA CGTCTTGAAC
TATCTCGGCT ACTCCTGGAT CGATCAGGGG ATCAATCTCG ACGACGCGAT GAAGATGATC
CGGCGCGCGG TCGATCAGCG CCCGGACGAC GGCTACATCG TCGACTCGCT CGGCTGGGCC
TATTACCGCA TCGGCAATTA CGAGGAGGCG GTGAAGAACC TCGAGCGCGC CATCGACCTG
AAGCCGGAAG ATCCCACCAT CAACGATCAT CTCGGCGACG CCTATTGGCG GGTCGGGCGC
ACCCTGGAGG CGAAATTCCA GTGGGTGCAT GCCCGCGATC TGAAGCCCGA GGCGGAAGAA
CTGCCGAAGA TCGAGGCCAA GATCGAGAAC GGGCTGCCGG ACGACGCCGG CGCGTCGGCG
GCCTCGGCGG ACAAGAAAAA AGAAGATGGC AAGGGCGGCT GA
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| Protein sequence | MLSTRLRRSM IAAVALAALP LSSPVLAQTP DHQNDSSVPF PTSRDLKSLT TAGSYLAARH
ASVQRDASAA ATFYRSALRA DPKNNELLDR AFISSLADGD IDEAVKLADR ILAIDKTNRV
ARLVVGIRDL KQKKYAAAQQ NINQSVRGPI TDLVATLISG WASYGAGDVR TAVGNIDKLA
GPEWYPIFKD LHSGMMLDLA GKQKDAGVRL ERAYKLDDSA LRVVDAYGRW LSRNKDDAAA
SAVYEAFDKK LARHPLVLEG IRETKAGKKL PPLVDSAQAG AAEALYGIGA SLTRRGGEDL
ALVYLQLALY LQPQHSLALL SLGDLYESVK KPQMAIKAYE RVPANSPLKR NAQIQLATDL
DAADRSEEAI KILKDVTAED PKDLEAIMAL GNIERGRKKF ADCAVTYSQG IDVLSGAEKN
NWVYYYFRGI CEERSKQWSK AEADMKKALE LQPEQPHVLN YLGYSWIDQG INLDDAMKMI
RRAVDQRPDD GYIVDSLGWA YYRIGNYEEA VKNLERAIDL KPEDPTINDH LGDAYWRVGR
TLEAKFQWVH ARDLKPEAEE LPKIEAKIEN GLPDDAGASA ASADKKKEDG KGG
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