| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4354 |
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| Symbol | |
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| ID | 3970831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4854361 |
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| End bp | 4855371 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927463 |
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| Product | farnesyltranstransferase |
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| Protein accession | YP_534196 |
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| Protein GI | 90425826 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.523786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00985531 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCCGTTA TCGTACCTTT CGAGGGACCC CCGACCGCTT CGATAGATCA ACTCGTCGAG
CTTGTCGCCG CCGATATGGA GCGCGTCAAC GCCGTCATCC TGTCGCGGAC CGGTTCCGAA
GTGACGATGA TTCCCGAGGT CGCCAACCAT CTGATCTCCT CGGGCGGCAA GCGGCTGCGG
CCGAACCTGA CGCTGGCGAT GGCGCAACTC ACCGGCTATT CCGGCGAAGG CCACATCAAG
CTCGCCGCCG CGGTCGAGTT CATGCACACA GCGACGCTGC TGCACGACGA CGTGGTCGAC
GAGAGCGAGA TGCGCCGCGG CAAGAAGTCG GCGCGGATGC TGTGGGGCAA CGAGGCCAGC
GTGCTGGTCG GCGATTTCCT GCTCGGCCAG GCGTTCCGGA TGATGGTCGA GGTCGGCTCG
CTGCGCGCGC TCGACATCCT GTCCTCCGCC GCGGCGACGA TTGCCGAAGG CGAGGTGATG
CAACTCGCCG CGGCCAAGAA TACCGCCACG ACGGAAGACG AATATCTCGC GGTGATCCGC
GGCAAGACCG CCGAACTGTT CGCCGCCGCC TGCGAAGTCG GGCCCGCGAT CGCCGGTCGG
CCGAAGGCCG AGCAATCGGC CTGCCGCTCG TTCGGCATGA ATCTCGGCAT CGCCTTCCAA
TTGGTCGACG ACGTGCTGGA TTACGGCGGC AAGGCCGCCA AGCTCGGCAA GAATGTCGGC
GACGATTTCC GCGAGGGCAA GATCACGCTG CCGGTGGTGC TGGCGTTCCG CCGCGGCAAC
GACGCCGAGC GGGCGTTCTG GATCAAGGCG CTGGAGCGCG GCGAGATCAC CGAGCCCGAC
CTCGATCAGG CGATCGGGCT GATGACCAAG CATCGCGCGC TCGAAGACAC CATCCAGCGC
GCGCATCACT ACGGCGCCAT GGCGGTCGAC GCGCTGGCGC TGTTCCCGAC CTCGCCGATG
AAGGCGGCGC TGGAGCAGGT GGTGGCGTTC TGCCTGGCGC GGTCGCACTA A
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| Protein sequence | MAVIVPFEGP PTASIDQLVE LVAADMERVN AVILSRTGSE VTMIPEVANH LISSGGKRLR
PNLTLAMAQL TGYSGEGHIK LAAAVEFMHT ATLLHDDVVD ESEMRRGKKS ARMLWGNEAS
VLVGDFLLGQ AFRMMVEVGS LRALDILSSA AATIAEGEVM QLAAAKNTAT TEDEYLAVIR
GKTAELFAAA CEVGPAIAGR PKAEQSACRS FGMNLGIAFQ LVDDVLDYGG KAAKLGKNVG
DDFREGKITL PVVLAFRRGN DAERAFWIKA LERGEITEPD LDQAIGLMTK HRALEDTIQR
AHHYGAMAVD ALALFPTSPM KAALEQVVAF CLARSH
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