Gene RPC_4352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4352 
Symbol 
ID3971232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4853177 
End bp4853938 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content72% 
IMG OID637927461 
Productmethyltransferase small 
Protein accessionYP_534194 
Protein GI90425824 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.165994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00950666 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGAGC CGTCCGATCT GACCGAGGAT GGATTTCTCG GCGGCCGGCT GCGCTTGCGG 
CAGCCCAAAT CCGGCCATCG TGCGGGCCAC GACGCGATGC TGCTGGCGGC GGCGACCGCG
GCGCGGCCCG GCGACCGGGT GGCCGATTTC GGCGCCGGGG TCGGCGCGGC CGGGCTGGCG
CTGGCGCGCC GCGTCGCCGG TGTCGATCTG ATGCTGCTCG AAATCGACGC CGGCCTGGCG
GAACTGGCGC GGGGCAACGC CGCGCTGAAC CAGCTCTCCG CCGCAGTCTT TGTGCTCGAT
GTCGAGGCCG GCGCCACGGC GTTCGCGGAG GCCGGGCTGT TTCCCGACAG CGTCGATGCG
GTGCTGATGA ACCCGCCGTT CAACGACGCC GCGCGGCATC GCGGCTCTCC CGATGCGGGG
CGGCGGCTGG CGCATGTCGC GGCGCGGTCC ACGCTCGAGG GCTGGGTTCA CGCCGCCCGG
CGGATTCTGA AATCCGGCGG CGAATTGACG CTGATCTGGC GTGCCGACGC GATCGCGGAG
GTGTTGGAGG CGCTGGACCG CGGCTTCGGC GGTCTGGTGA TCCTGCCGGT GCACCCGCAA
CCCGGGCTGC CGGCGATCCG TGTGCTGGTG CGGGCCAGCA AAGGCGGACG GGCCCCATTG
TCGCTGCTGC CCGGGCTGAT GCTGAGGGAT GAGGCCGGTA CAGAAACTCT CAAGGCCGCC
GCGGCGCTGA GAGGCGAGGC CTTGCCATTG TCAGCGACCT GA
 
Protein sequence
MSEPSDLTED GFLGGRLRLR QPKSGHRAGH DAMLLAAATA ARPGDRVADF GAGVGAAGLA 
LARRVAGVDL MLLEIDAGLA ELARGNAALN QLSAAVFVLD VEAGATAFAE AGLFPDSVDA
VLMNPPFNDA ARHRGSPDAG RRLAHVAARS TLEGWVHAAR RILKSGGELT LIWRADAIAE
VLEALDRGFG GLVILPVHPQ PGLPAIRVLV RASKGGRAPL SLLPGLMLRD EAGTETLKAA
AALRGEALPL SAT