Gene RPC_4337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4337 
Symbol 
ID3971217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4834278 
End bp4835267 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content67% 
IMG OID637927446 
Productalcohol dehydrogenase GroES-like protein 
Protein accessionYP_534179 
Protein GI90425809 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.270219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0883749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGAA CGTTCAAGGC GATCCGGATC GACAAGGCGG ACAAGGGCAC CGTGGCGGCG 
CTGACCCAGT TCGACGAAGC CGAGCTGATG GAGGGCGACG TCACCGTCGC CGTCGAATGG
TCGACGGTGA ACTACAAGGA CGGTCTCGCG GTCACCGGCA AGGCGCCGGT GGTGCGGCGG
TTTCCGATGA TCGCCGGGAT CGATCTCGCC GGCACCGTGC TGCAATCGTC GCATCCGGAT
TGGCAGGCCG GCGACAAGGT GATCTGCAAC GGCTGGGGCA TGGGCGAGAC CCATTTGGGC
GCCTATGCGG AGAAGGCCCG GGTCAAGGGC GACTGGCTGG TGCGGCTGCC GGAGGGGCTG
TCGACCCGTG ACGCGATGGC GATCGGAACC GCCGGCTACA CCGCGATGCT CGCCGTGCTG
GCGCTGGAAA ATCACGGCCT CACGCCCGCC GCGGGCCCGA TCGTGGTGAC CGGCGCCGCC
GGCGGCGTCG GCTCGGTGGC GATCGCGGTG CTGTCGAAAC TCGGCTATCA CGTCATCGCC
TCGACCGGCC GGATCGCCGA AGTGCCGTAT CTGCGCGAGC TCGGCGCCTC GGAGGTGATC
GAGCGCAGCG AATTGAACGG CCCCGCCAAG CCGCTCGCCA AGGAGCGCTG GGCCGGCGGC
ATCGACAGCG TCGGTTCCAC CACGCTGGCC AACGTGCTGT CGATGACCAA GTACCGCGGC
GCCATTGCGG CCTGCGGTCT CGCCGCCGGC ATGGACCTGC CGACCTCGGT GGCGCCGTTC
ATTTTACGCG GGGTGTGTCT TCTCGGCATC GATTCGGTGA TGTGCCCGAT CGCGTTGCGG
CAGTTGGCCT GGCTGCGTCT GGCGAGCGAC CTGGACAAGG GTAAACTCGC TGAGATCACT
CACGAAATAA ATTTGGACGA GGTGATCGCC GCCGGCGCCA AGGTGCTGGC CGGCGAGGTG
CGCGGTCGAA TCGTGGTAAA AATATGCTGA
 
Protein sequence
MVGTFKAIRI DKADKGTVAA LTQFDEAELM EGDVTVAVEW STVNYKDGLA VTGKAPVVRR 
FPMIAGIDLA GTVLQSSHPD WQAGDKVICN GWGMGETHLG AYAEKARVKG DWLVRLPEGL
STRDAMAIGT AGYTAMLAVL ALENHGLTPA AGPIVVTGAA GGVGSVAIAV LSKLGYHVIA
STGRIAEVPY LRELGASEVI ERSELNGPAK PLAKERWAGG IDSVGSTTLA NVLSMTKYRG
AIAACGLAAG MDLPTSVAPF ILRGVCLLGI DSVMCPIALR QLAWLRLASD LDKGKLAEIT
HEINLDEVIA AGAKVLAGEV RGRIVVKIC