| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4325 |
|---|
| Symbol | |
|---|
| ID | 3971513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4824300 |
|---|
| End bp | 4825073 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637927434 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_534167 |
|---|
| Protein GI | 90425797 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.250305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGCC GGTTCGTAAT CACCTCGCCG CCGGCTGCGG TGCGGTTGGC GTTCGGCTAT
GCCGAGCAGC CGAATTTCCC GGCGCGCTAC AATATTGCCC CGACCCAGCC GATCCCGGTG
GTGATCCTGG ACAACGGTGC CCGCCGGTTC CGGCTGATGC GCTGGGGGCT GATCCCATCC
TGGGTCAAGG ATCCCCGCAA TTTCAGCCTG TTGATCAATG CCCGCTCGGA AACCGTGCTG
GACAAGCCGG CGTTCCGCAA CGCCATGAAG CGGCGGCGCT GCCTGGTTCC GGCCGACGGC
TATTACGAGT GGCAAAGCGG CGGCAAGCCG AAACAGCCGT ATTTCATCCA TCCCGCCGAC
GGCGTGCCGC TCGGCTTCGC TGGCTTGGCG GAAACCTGGG TCGGCCCGAA CGGCGAGGAA
CTTGACACCG TGGCGATCGT CACCACCGCG GCGTCGAAGC CGATGGCGGT GCTGCACGAT
CGGGTGCCGG TGACGATCGC GCCGGGCGAT TATGCGCGCT GGCTGGACTG CGCCGCGGTG
TCGGCTGAGG AAGCGGCGAT GCTGCTGCAT CCGCCGGCCG AGGGCGCGTT GCGCTGGCAT
CCGGTGTCGA CCGCGGTCAA CCGCGTCGCC AACGACGATG CGCAATTGAT CCTGCCGATC
GCAGTCGGAG AGCCGGCGCC GATCGAGCCG CCGAAGCCGG CCAAGGCCGC GGCGACGTCC
CGCCGCGCCG TCAAGGCGGC GTCCGGCGAC GAGGGACAGG GCTCGTTATT CTAG
|
|---|
| Protein sequence | MCGRFVITSP PAAVRLAFGY AEQPNFPARY NIAPTQPIPV VILDNGARRF RLMRWGLIPS
WVKDPRNFSL LINARSETVL DKPAFRNAMK RRRCLVPADG YYEWQSGGKP KQPYFIHPAD
GVPLGFAGLA ETWVGPNGEE LDTVAIVTTA ASKPMAVLHD RVPVTIAPGD YARWLDCAAV
SAEEAAMLLH PPAEGALRWH PVSTAVNRVA NDDAQLILPI AVGEPAPIEP PKPAKAAATS
RRAVKAASGD EGQGSLF
|
|---|
| |