| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4311 |
|---|
| Symbol | |
|---|
| ID | 3973913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4813092 |
|---|
| End bp | 4813757 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637927420 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_534153 |
|---|
| Protein GI | 90425783 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0333339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0442497 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTC TGCTGATCGA GGACGATACC CGGCTGGCGC GGCAGATCGC CGAGGCGCTC
GAGCGCGCCG GCTACACCGT CGATCGCAGC GCCGACGGCG AGGACGGCTG GTTCATGGGC
GACAGCGGGG TCTATGACGC CGCGATTCTC GACCTCGGGC TGCCGGGGCT CGACGGGCTC
TCTGTGCTGC GGCGCTGGCG CGACGCCAAG CGCGCGATGC CGGTGCTGAT CCTGACCGCG
CGGGCGTCGT GGCGCGAAAA GGTCACCGGG CTGCGCGAAG GCGCCGACGA CTATCTCACC
AAGCCGTTCG AGATCGAAGA ACTGCTGGCG CGGATCGAGG CGCTGATCCG GCGTGCCTCG
GGCCACGCCA CCGCGGAGAT CAGCGTCGCC GGGCTCAGGC TCGATCCATC GACGCAACGC
ATCAGCCGCG ATGGCGCGCC GCTCGATCTC ACCGCGCTGG AATATCGCGC GCTGGCCTAT
CTGATGATGC ACCCGGCCAA GGTGGTGTCG AAGACCGAAC TCACCGAGCA CATCTACGGC
CAGGACGACG ACCGCGATTC CAACGTCATC GAGGTTCTGG TCAACCGGCT GCGCAAGAAG
ATCGGCGCCG ATGCGATCCG CACCCGGCGC GGTCAGGGCT ACCAGCTGGC GGACGTGACG
CCATGA
|
|---|
| Protein sequence | MRILLIEDDT RLARQIAEAL ERAGYTVDRS ADGEDGWFMG DSGVYDAAIL DLGLPGLDGL
SVLRRWRDAK RAMPVLILTA RASWREKVTG LREGADDYLT KPFEIEELLA RIEALIRRAS
GHATAEISVA GLRLDPSTQR ISRDGAPLDL TALEYRALAY LMMHPAKVVS KTELTEHIYG
QDDDRDSNVI EVLVNRLRKK IGADAIRTRR GQGYQLADVT P
|
|---|
| |