| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4305 |
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| Symbol | |
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| ID | 3973906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4805778 |
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| End bp | 4806761 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637927413 |
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| Product | Sua5/YciO/YrdC/YwlC |
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| Protein accession | YP_534147 |
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| Protein GI | 90425777 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0757875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTGG ACCTTGCGAC GCCGATCGTC GCCGCCGGCG AAGATGGCGT GGCGAAAGCC
GTGAAATGCC TGCGGGACGG CGGCTTGGTG GCGTTTCCGA CCGAGACGGT CTACGGGCTC
GGCTGCGACG CGGGCAATGC GGCGGCGATC GCGCGGCTGT ATCAGGCCAA GGGCCGGCCG
TCGTTCAATC CGTTGATCGC CCATGTGGCG GATCTGGCGG CGGCGGAGCG GATCGGCCGA
TTCGACGGCG ATGCCCGGCG GCTCGCCGCT TCGTTCTGGC CGGGGCCGCT GACCCTGGTG
GTGCCGAAGG CCGAGCATTG CCCGGTGGCC GATCTCGCCA CCGCCGGACT CGACACCGTT
GCGATTCGGG TGCCGCTTCA TCCGGTGGCG CAAGCTATTC TGCGCGGCTT CGGCGGCGCG
GTGGTGGCGC CGTCGGCGAA TCGCTCCGGC CACGTCTCGC CGACCACGGC GGCGCATGTG
CATGTCGACC TCGACGGCCG CATCCAGCTG ATCGTCAATG GCGGGCCGGT GTCGGTCGGC
GTCGAATCGA CGATTGTTGC GTGTTTCGAC CAGCCGGTAC TGCTGCGGCC CGGTGGTCTG
CCGCGCGAAA AGATCGAGGC CGTGCTCGGC CGCGCGTTGG CGCAGCCCGT GGCCGCCGAT
CCGACGCGGC CGCTGGCGCC CGGCATGTTG GCCTCGCATT ACGCGCCGCG GACGAAAGTG
CGGCTGGAAG CGACGCATGT CGAGCCCGGC GAGGCGCTGC TGGCGTTCGG CGCGGCAGCG
TTGCCGGGCG TCGATGCGAC GACCGTGGTG ATGAACCTGT CGGAGCAGGG CGATTTGGCG
GAAGCCGCCG CCAATCTGTT CGGTTATCTG CGCGCGCTCG ACGCCAAGGG CGCCAGCGGC
ATCGCGGTGA TGCCGGTGCC GCGGCATGGG CTCGGCGAAG CCATCAACGA CCGCCTGCGC
CGCGCCGCGC TGCCGCGGGA GTAG
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| Protein sequence | MKLDLATPIV AAGEDGVAKA VKCLRDGGLV AFPTETVYGL GCDAGNAAAI ARLYQAKGRP
SFNPLIAHVA DLAAAERIGR FDGDARRLAA SFWPGPLTLV VPKAEHCPVA DLATAGLDTV
AIRVPLHPVA QAILRGFGGA VVAPSANRSG HVSPTTAAHV HVDLDGRIQL IVNGGPVSVG
VESTIVACFD QPVLLRPGGL PREKIEAVLG RALAQPVAAD PTRPLAPGML ASHYAPRTKV
RLEATHVEPG EALLAFGAAA LPGVDATTVV MNLSEQGDLA EAAANLFGYL RALDAKGASG
IAVMPVPRHG LGEAINDRLR RAALPRE
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