Gene RPC_4227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4227 
Symbol 
ID3972950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4703781 
End bp4704665 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content69% 
IMG OID637927330 
Producthypothetical protein 
Protein accessionYP_534070 
Protein GI90425700 
COG category[S] Function unknown 
COG ID[COG5343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGT ACAGCGAAGA CCATATCGCG CTCGCCGCGG AATATGCGCT CGGCACGCTG 
GACGCCGACG AGCGCGCCCA GGTCTCATCG ATGATGTCGG TCGACAAGGA CTTCGCCGCG
ATGGTCGAGG CCTGGGAGCG CAAGCTCGGC GCGCTCAACC AGATGGTCGA CGCGGTCGAG
CCGCCGGCGG AGTTGTGGGA CCGCATCAAG CTGGCCGCCG GCCTGTCCGG CGCGCAGCAG
CCGTTGCAGA TTCCGCCGCT GCCGGTCGCG CCCGTGGTCG TGGCGCCTCA GCCCGAGCCC
GCGGTCTCCA CCGGGCTCAG CCCGGAATCC AAGCGCGTGG TGCATTTCGC GTTCCGCGCC
AAGATGTGGC AGTGGGGCGC GATGGGCATA GGCGCGATCG CAGCCTCGCT GTTCGCCATC
ATCGTCGCGC AACTGGCGTA TCCGGACATC CTGCCGAACG AATTGCGCCC CGCGATTCGC
ACCCAGGTGG TGCAGGTCGC AGGCCCGCCG CCGCCGATCC CGGCGCAATA CGTCGCGTTG
CTGCAGAAGG ACGCCGCCTC GCCGGCGTTC ATCCTGACGG TGAACGCCGC CACCAAGGAT
TTCACCGTGC GCAAGGTCGG CGCCGAGCAG GAGCCGGGCA AGAGCTACGA GTTGTGGCTG
GTGTCGGACA AATTGCAGCG GCCGCGCTCG CTCGGCGTGA TCGGCAGCGA CGACTTCACC
ATCCGCGCCG CCTTGGCGGC GTTCGACAGC GACACCGTGA GCAAGGCGAC CTATGCGGTC
ACCGTGGAGC CGGAAGGCGG CTCGCCGACC GGCGTCGCCA CCGGGCCGAT CGTGTTCACC
GGCAAGCTGA TCGAGACCGT GCCGCCGACG GCGCCGACCA AATAG
 
Protein sequence
MMEYSEDHIA LAAEYALGTL DADERAQVSS MMSVDKDFAA MVEAWERKLG ALNQMVDAVE 
PPAELWDRIK LAAGLSGAQQ PLQIPPLPVA PVVVAPQPEP AVSTGLSPES KRVVHFAFRA
KMWQWGAMGI GAIAASLFAI IVAQLAYPDI LPNELRPAIR TQVVQVAGPP PPIPAQYVAL
LQKDAASPAF ILTVNAATKD FTVRKVGAEQ EPGKSYELWL VSDKLQRPRS LGVIGSDDFT
IRAALAAFDS DTVSKATYAV TVEPEGGSPT GVATGPIVFT GKLIETVPPT APTK