Gene RPC_4219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4219 
Symbol 
ID3972941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4693720 
End bp4694958 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content63% 
IMG OID637927321 
Productmethyltransferase type 12 
Protein accessionYP_534062 
Protein GI90425692 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCA AACGGCTCTG CCGGCATTGC TCCAGCCCGC TCGACATCCT GGTCGCCGAT 
CTCGGCAGCA CCCCGATCTC GAACGATTAT TTGTCCGCCG AGGCGGTGGA CGGCGGCGAG
CCCTACTATC CGCTGCGCAC CTATGTCTGC GAAAATTGCA GGCTAGTGCA GCTGCAGAAC
TTCTTCCGCT CCGACGAACT GTTCCGCGCC GACTACGCCT ATTTCTCGTC CTATTCGACG
TCGTGGCTGG CGCATGCCGA ACGCTATGCG CAGCAGATGC AGCAGCGCTT TGCGATCGAC
GGATCGAAGC TGGTGGTCGA GATCGCCAGC AACGACGGCT ATCTGCTGCA GTACTTCCAG
AAGGCCGGCA TTCCGGTGCT CGGCATCGAG CCCAGCGCCT CGGTGGCGAA GGTGGCGCGG
GACGAACGCA ACATCTCGAC CCTGGTGAAG TTCTTCGGCA GCGCCACCGC GACCGAACTG
GTCGACAGCG GCACCCGCGC CGATCTGACG ACGGCGAACA ACGTGCTCGC CCACGTTCCC
GACATCAACG ATTTCGTCCG CGGCTTTGCC ATCCTGCTGG CCGACAACGG TGTCGCGACG
TTCGAATTCC CGCATCTGTT GCAGATGTTC CAGCACAATC AGTTCGACAC TATCTACCAC
GAGCATTTCT CCTATCTGTC ACTCTTGGCC TGCGAACGGA TCTTCGAATC GCAGGGGCTG
CGGGTGTTCG ACGTCGAGGA ACTGCCGACC CACGGCGGCT CGCTGCGGCT GTTCGCCTGC
CGCAAGGACG CCGAGCACAA GCCTCAGCCG GGCCTCGCCG CGGTTCGCGC CCGCGAAGCC
GACATGGGAT TGCAAACCAA CGCGCCCTAT CTGGGATTCG CCGAGCGGGT CCGCGAAACC
AAGCGCGCGC TGCTGTCGCT GCTGATCGAC CTGAAGCGCC AGGGCAAGCG GATCGCCGCC
TACGGCGCGC CGGCCAAGGG CAATACGCTG TTGAACTACT GCGGCATCGG CGCCGACATG
ATCGACTTCA CCGTCGATCG CTCGCCGCAC AAGCAGGGCA TGTTCCTTCC CGGCACCAGG
CTGCCGATCT TGGCGCCGGA GGCGATCGCC GAGGCCAAGC CCGATTATAT CGTGGTGCTG
CCGTGGAATC TGGAAGCAGA AATCGTCGAA CAAATGGCCT CGGTGCGCGC CTGGGGCGGC
AAGTTCATCA TTCCGATTCC GCTGCCGCGC ATTGTGTGA
 
Protein sequence
MTSKRLCRHC SSPLDILVAD LGSTPISNDY LSAEAVDGGE PYYPLRTYVC ENCRLVQLQN 
FFRSDELFRA DYAYFSSYST SWLAHAERYA QQMQQRFAID GSKLVVEIAS NDGYLLQYFQ
KAGIPVLGIE PSASVAKVAR DERNISTLVK FFGSATATEL VDSGTRADLT TANNVLAHVP
DINDFVRGFA ILLADNGVAT FEFPHLLQMF QHNQFDTIYH EHFSYLSLLA CERIFESQGL
RVFDVEELPT HGGSLRLFAC RKDAEHKPQP GLAAVRAREA DMGLQTNAPY LGFAERVRET
KRALLSLLID LKRQGKRIAA YGAPAKGNTL LNYCGIGADM IDFTVDRSPH KQGMFLPGTR
LPILAPEAIA EAKPDYIVVL PWNLEAEIVE QMASVRAWGG KFIIPIPLPR IV