| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4216 |
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| Symbol | |
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| ID | 3972671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4690861 |
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| End bp | 4691625 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927318 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_534059 |
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| Protein GI | 90425689 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCACA ATCCCTCCCT TGCTTCCCAA AACGCCCTGA TCGTCGGCGC CACCTCGCGC
CTCGCCCAGG CGATCGCGGT GGAGTACGCA CAGCGGCGGG TGGCGATCGA ACTTGCCGGG
CGCGACGCCG GCGAACTCGC ACGGATCGCA GCCGATCTTG CGATCCGTCA CGGCGCGACG
GTCCGCACCC AGCCGTTCGA CGCGCTCTCG AACGAAAGCA TCGATGCGCT CGCCGCCGAG
CTGTTGGGTC GCGACGCGCT GCCCTCCGAC CTGGTCTTCG TGATCGGATA CGCCGAAAAT
CTGGAGCAGT CGCATCGGGA CGTCGCACTT GCCGCGCAAC TGCTCGCCAC CAACTATGCG
GCGATCGTTC GTCTGCTGAC GCAGCTGATG CCGCGGCTGG AGTCCTCTCG CGACCACCGC
ATCGCCTTCG TCGGATCGGT CGCCGGCGAT CGCGGCCGGC GAACCAATTT CGTCTATGGC
GCCGCCAAAG CCGCGCTGGC TGCCTATGCC CAGGGCTTGC GGGCGAGGTT GCTGCCGACC
GGCAGCCAGG TGCTGACCAT CAAGCTCGGC TATATGGACA CCCGCCTCGC CTTCGGCAAA
ACCCCGGGAC TGATCACGCC ACAGCCGCGA ACGGTGGCAC GATCCATCCT CGCCGCGATG
GACCGCAATG CGATGGTGGT CTATGTGCCA TGGTATTGGC GTCCGATCAT GACCTTGCTG
CGGCTGTTGC CGGAAGCGAT TTTCATCCGA TTGCCGCTGC CGTGA
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| Protein sequence | MSHNPSLASQ NALIVGATSR LAQAIAVEYA QRRVAIELAG RDAGELARIA ADLAIRHGAT
VRTQPFDALS NESIDALAAE LLGRDALPSD LVFVIGYAEN LEQSHRDVAL AAQLLATNYA
AIVRLLTQLM PRLESSRDHR IAFVGSVAGD RGRRTNFVYG AAKAALAAYA QGLRARLLPT
GSQVLTIKLG YMDTRLAFGK TPGLITPQPR TVARSILAAM DRNAMVVYVP WYWRPIMTLL
RLLPEAIFIR LPLP
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