Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4204 |
Symbol | |
ID | 3972659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4674677 |
End bp | 4675873 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637927306 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_534047 |
Protein GI | 90425677 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.186805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.199136 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAC GGCGCGCCGA CGTCGTGATG TTCTCGACGG CCGATTGGGC GTCGCAGTAC TGGACCAACA AGCAGCACAC CGCTGCGCAT CTCGCCGCGC GCGGCCATCG CGTGCTCTAT GTCGAAACCG TGGGGCTGCG CCGCCCCGGC CTCAACAGCA TGGACGTCGG GCGGATCTGG GCGCGGCTGC GGCGCGGTCT GAAGCCGATC GCGGAAGTGC GCGACAATCT GTGGGTGCTG TCGCCGCTCA CCGTGCCGCT CGGTCAGCGC TATGCGCCGA TCGCCGCATT CAACCGCTGG CAGTTGCGGG CGCGGATCGG CGGCTGGCTG CGCAAACACC GCATCGGCCG GCCGCTGATC TGGACCTATC ACCCCTACAT GCTGGAGGCG GCCGAGGCGC TCGATCCCTC GGCCATGGTC TATCATTGCG TCGACGATAT CGGCGCGGTG CCGGGCGTCG ACCGCGCCGC CTACGACGCC GCCGAACAGC GGCTGTTGCG GCGCGTCGAT CTGGCCTTCA CCACCAGCGG GCATCTGCAG CAGCGCTGCG CCGCCATCGC CGGCGAGCGC GCCCGTTACT TCGGCAATGT CGCCGATATC GACCATTTCG CCACCGCGCG CGGCAACATC GATCTGCCGC CGGAACTCGC CGCGATTCCG CGGCCCAGGC TCGGCTATGT CGGGGTGATC TCCGACTTCA AGATCGATCT GGAACTGTTG CAGACGCTGG CCGTGGCCCA TCCCGATTGG CATTTCGTCT TCATCGGCGA CGAACGCGAG GGCCAGCACA GCGACGTCGT GACGCGCATG GCGCAGCTGT CGAACGTGCA TTTTCTCGGC TGGCGATCCT ATCAAGACCT GCCGCGTTAT CTTGCCGGCT TCGATGTCGG CCTGCTGCCG CAGCTGATCA ACGACTACAC CCGCGCGATG TTTCCGATGA AGTTCTTCGA ATACCTCGCA GCCGGACTTC CAGTCGTCGC CACCCCGCTG CCGGCGTTGC GCGACCTTGC CGCGGTTCAC GGCATCGGCG CCGATACAGC AACGTTTGCG CAGGCGATTT CCGCAGCTCT CGATGGCCGC GGGCCGCAGC CGCTACCGAT CGACGACCCG CTGCTACAGG CCAATTCCTG GGACGCGCGG CTCGACCAGA TGTTGGCAAT GATCGAGGCA ACCTCGGCCG CGTCGCCGCG CGGTTAG
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Protein sequence | MTTRRADVVM FSTADWASQY WTNKQHTAAH LAARGHRVLY VETVGLRRPG LNSMDVGRIW ARLRRGLKPI AEVRDNLWVL SPLTVPLGQR YAPIAAFNRW QLRARIGGWL RKHRIGRPLI WTYHPYMLEA AEALDPSAMV YHCVDDIGAV PGVDRAAYDA AEQRLLRRVD LAFTTSGHLQ QRCAAIAGER ARYFGNVADI DHFATARGNI DLPPELAAIP RPRLGYVGVI SDFKIDLELL QTLAVAHPDW HFVFIGDERE GQHSDVVTRM AQLSNVHFLG WRSYQDLPRY LAGFDVGLLP QLINDYTRAM FPMKFFEYLA AGLPVVATPL PALRDLAAVH GIGADTATFA QAISAALDGR GPQPLPIDDP LLQANSWDAR LDQMLAMIEA TSAASPRG
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