| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4176 |
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| Symbol | |
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| ID | 3972319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4639503 |
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| End bp | 4641431 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927279 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_534020 |
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| Protein GI | 90425650 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACT ATGCGGCCCG CGTCGCCGAA GCCGACACTT ATCCGAAGTT GTTGCGGCTC
AACGCGCAGC AGCACGGCGC CGACATCGCG CTACGCGAGA AAGACTTTGG ACTGTGGCGC
GAAGTCACCT GGTCCGACTA TCAGGAGCGG GTGCAGAATT TCGCGCTCGG CATGCTCGAG
CTCGGCGTGC AGCGCGGCGA CGTCATCGGC ATCATCGGCG ACAACCGCCC CGACTGGGTC
GCGGCCGAAA TCGCCAGCCA CGCGCTCGGC GCGATGAGCC TTGGCCTCTA TCGCGACGTG
CTCGACGACG AGGCGGCGTA TCTTTTGAGC TACGGCGCGG CCAAGCTGGT GTTCGCCGAG
GACGAGGAAC AGGTCGACAA GCTGCTGCTG CTCGGCGAGC GCGTGCCACA GCTTTGCCAC
ATCGTATATT CCGACCCGCG CGGCATGCGG AAATACGACG ATCCCCGGCT GATCGACGCC
GATCAACTCG CCGCAATGGG CCGCGCCCGC GCCGGGCACA ACCCGATGTT GTACGATTCG
CTGGTCGATG CGACGCACGG CGAAGACGTC GCGATTCTCT GCACCACCTC GGGCACCACC
GCACATCCGA AGCTGGCGAT GCTCGCGAGC GGCCGCGTGC TGCGGCACTG CGCGGCCTAT
CTGGCCTTCG ATCCGAAAGG CCCCGACGAC GAATACGTCT CGGTGCTGCC GCTGCCCTGG
ATCATGGAGC AGGTCTATGT GCTCGGCAAA GGCCTGCTCA GCCGCATGAA GGTGAACTTC
GTCGAGCAGC CCGACACCAT GATGAACGAT TTTCGCGAGA TCGCGCCGAC CTTCGTGCTG
TTCGCGCCAC GGGTCTGGGA GAGCATCGCC GCCGACGTCC GGGCGCGAGT GATGGACGCT
TCGCCCTTGA AACAAGGGCT CTATAACCTC GGCATGAAGG CCGGCCTGTC GGCGCTGGCG
CGCGGCGAGA CCTCGCTGTT CGCCAATGCT ATTCTGTTTC GCGCCCTGCG CGATCGCCTC
GGCTTCACGC GGCTGCGCTC GGCAGCGACC GGCGGCGCCG CGCTCGGCCC CGACACTTTC
AAGTTCTTCC AGGCGATGGG CGTGCCGTTA CGCACGCTGT ACGGTCAGAC CGAGTTGCTC
GGCGCCTACA CGCTGCATCG CGAGGGCGAG GTCGATCCCG ACACCACCGG GGTGGCGATG
TCCGAGGAGA TCGAGATCCG CATCGACAAT CCCGACATCC ACGGCGTCGG CGAAATCGTG
GTGCGCCACC CCAACATGTT CCTCGGCTAC TACAAGAACG ACGAGGCCTC CGCCGACATC
ATCGACGGCT GGATGCAATC CGGCGACGCC GGCTATTTCA ACAAGAGCGC GCAGCTGGTC
GTGATCGACC GCATCAAGGA TCTGGCCGAG ACCTCGCACG GCGAACGGTT CTCGCCGCAA
TATATCGAGA ACAAGCTGAA GTTCTCGCCT TACATCGCCG AGACCGTGGT GCTCGGCGCC
GGCCGCGACA TGCTGGCGGC GATGATCTGT ATCCGGTTTT CGATCATCTC GAAATGGGCG
GAGAAGAAAC GGATCTCCTT CACCACCTAC ACCGACCTCG CCTCGCGGCC GGAGGTCTAT
GCGCTGTTGC GCAAGGAGGT CGAAGCGGTC AACGCCACGC TGCCGGCGGC GCAGCGGATC
GGCAAGTTCC TGCTGCTCTA CAAGGAGCTC GACGCCGACG ACGGCGAACT GACCCGCACA
CGAAAAGTCC GCCGCAGCGT CATCAACGAG AAATACGCCG ACATCATCGA GGGCGTTTAT
GGCGGCGCGC CGGAAATTCC GGTCGACACC ATGATTCAGT TCCAGGACGG CACCACGCAA
CGCATCCGCA CCAGGCTCGC CGTGGTCGAC CTCGCCCGCG ACGCGGCGGC AATGGGGGCG
GCGGAATGA
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| Protein sequence | MMNYAARVAE ADTYPKLLRL NAQQHGADIA LREKDFGLWR EVTWSDYQER VQNFALGMLE
LGVQRGDVIG IIGDNRPDWV AAEIASHALG AMSLGLYRDV LDDEAAYLLS YGAAKLVFAE
DEEQVDKLLL LGERVPQLCH IVYSDPRGMR KYDDPRLIDA DQLAAMGRAR AGHNPMLYDS
LVDATHGEDV AILCTTSGTT AHPKLAMLAS GRVLRHCAAY LAFDPKGPDD EYVSVLPLPW
IMEQVYVLGK GLLSRMKVNF VEQPDTMMND FREIAPTFVL FAPRVWESIA ADVRARVMDA
SPLKQGLYNL GMKAGLSALA RGETSLFANA ILFRALRDRL GFTRLRSAAT GGAALGPDTF
KFFQAMGVPL RTLYGQTELL GAYTLHREGE VDPDTTGVAM SEEIEIRIDN PDIHGVGEIV
VRHPNMFLGY YKNDEASADI IDGWMQSGDA GYFNKSAQLV VIDRIKDLAE TSHGERFSPQ
YIENKLKFSP YIAETVVLGA GRDMLAAMIC IRFSIISKWA EKKRISFTTY TDLASRPEVY
ALLRKEVEAV NATLPAAQRI GKFLLLYKEL DADDGELTRT RKVRRSVINE KYADIIEGVY
GGAPEIPVDT MIQFQDGTTQ RIRTRLAVVD LARDAAAMGA AE
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