| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4106 |
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| Symbol | |
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| ID | 3973156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4567266 |
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| End bp | 4568855 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927210 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_533951 |
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| Protein GI | 90425581 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.885327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC CCAAAGTTTT GATTTCAGAC GCCCTGTCCC CCGCTGCCGT GCAGATCTTC
AAGGATCGCG GCATCGACGT CGACTTCCAG CCGGCGCTCG GCAAGGACAA AGAGAAGCTC
GCCGAGATCA TCGGCAATTA TGATGGCCTG GCGATCCGCT CGGCCACCAA GGCCACCGCG
AAGATCCTCG AGAAGGCCAC CCGCCTCAAG GTGATCGGCC GCGCCGGCAT CGGCGTTGAT
AACGTCGAGA TCCCCGCCGC CACCGCCCGC GGCATCATCG TGATGAACAC GCCGTTCGGC
AATTCGATCA CCACCGCCGA GCACGCGATT ACGTTGATGT TGTCGCTGGC CCGCGAAATC
CCGGCGGCCG ATGCTTCGAC CCAGGCCGGC AAGTGGGAGA AGAACCGCTT CATGGGCGTC
GAGATCACCG CCAAGACGCT CGGCGTGATC GGCTGCGGCA ACATCGGCTC GATCGTCGCC
GACCGCGCGC TCGGCCTGAA GATGAAGGTG ATCGCGTTCG ACCCGTTCCT GTCGCCGGAG
CGCGCCAAGG ACCTCGGCGT CGAGAAGGTC GAGCTCGAAG ACCTGTTCAA GCGCGCCGAC
TTCATCACGC TGCACACCCC GCTCACCGAC AAGACCCGCA ACATCATCGA CGCCGCTGCA
ATCGCCAAAA TGAAGAAGGG CGTGCGGATC ATCAACTGCG CCCGCGGCGG TCTGGTCGAC
GAGCAGGCGC TGGTCGATGC GTTGAACTCC AAGCAGGTTG CCGGCGCCGC CTTCGACGTG
TTCGTCGAGG AGCCGGCCAC CAAGAACGTG CTGTTCGGCC ACGCCAACGT GATCTGCACC
CCGCATCTCG GCGCTTCCAC CACCGAAGCC CAGGAGAACG TCGCGCTGCA GGTCGCCGAG
CAAATGTCGG ACTACCTGTT GACCGGCGCG ATCTCCAACG CGGTCAACTT CCCCTCGATC
ACCGCGGAAG AAGCCCCGAA GCTGAAGCCG TTCATCGAGC TCGCCGAAAA GCTCGGCTCG
TTCGCCGGCC AATTGACCGA AAGCGGCATC TCCAAGGTGA CCATCACCTA TGAGGGCGCG
GTCGCCGAAA TGAAGATCAA GGCTTTGACC TCGGCGGCGC TCTCCGGCCT GCTGCGGCCG
ATGCTCGGCG ACGTCAACGT GGTGTCGGCG CCGGTCGTCG CCAAGGAGCG CGGCATGGTG
GTCGACGAGG TGGTTCGCGC CGCCGAGAGC GACTACGAGA GCCTGATCAC CGTCACCGTC
ACCACCGCCG ACATGAAGCG TTCGGTGTCC GGCACGGTGT TCGCCGACGG CCATCCGCGC
CTGGTCGACA TCAAGGGCAT CCGGGTCGAC GCCGAATTCG GCAAGTCGAT GATCTACGTC
ACCAACGAGG ACAAGCCGGG CTTCATCGGC AAGTTCGCGA GCCTCTTGGG CGACGCCAAG
ATCAACATCG CCACCTTCAA TCTCGGCCGT CACGAACTGG GCGGCGACGC CATCGCGCTG
GTCGAAGTCG ACGGCGCGGT GCCGGCCGAG GTGATCGCCA AGGTGCAGGC GCTGCCGCAG
GTCAAGCAGG CCAAAGCGCT GGTGTTCTAA
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| Protein sequence | MTAPKVLISD ALSPAAVQIF KDRGIDVDFQ PALGKDKEKL AEIIGNYDGL AIRSATKATA
KILEKATRLK VIGRAGIGVD NVEIPAATAR GIIVMNTPFG NSITTAEHAI TLMLSLAREI
PAADASTQAG KWEKNRFMGV EITAKTLGVI GCGNIGSIVA DRALGLKMKV IAFDPFLSPE
RAKDLGVEKV ELEDLFKRAD FITLHTPLTD KTRNIIDAAA IAKMKKGVRI INCARGGLVD
EQALVDALNS KQVAGAAFDV FVEEPATKNV LFGHANVICT PHLGASTTEA QENVALQVAE
QMSDYLLTGA ISNAVNFPSI TAEEAPKLKP FIELAEKLGS FAGQLTESGI SKVTITYEGA
VAEMKIKALT SAALSGLLRP MLGDVNVVSA PVVAKERGMV VDEVVRAAES DYESLITVTV
TTADMKRSVS GTVFADGHPR LVDIKGIRVD AEFGKSMIYV TNEDKPGFIG KFASLLGDAK
INIATFNLGR HELGGDAIAL VEVDGAVPAE VIAKVQALPQ VKQAKALVF
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