| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4104 |
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| Symbol | |
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| ID | 3973154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4563437 |
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| End bp | 4565197 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927208 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_533949 |
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| Protein GI | 90425579 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.783692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACA GTTCCGGAAG GTTATGCCGT TACTGTGATG CCGCCCGCCC CGCTGCAGTC
GCCGGAGACA TCGCCGTGAA ATTCAACAAT CTTACGATCA CCCCGAAACT TGGCATCCTT
GTGGGGGTGA CGTTGCTCGG CCTATGCGCC GCCGGCGTGC TCGCCGGATC GATGATGCAG
CGGGAGATGC TGAACGCGCG GATCGAGCAG ACCAAGACGG TGGTCGAGGT GGCGCGCACC
ATGGCGATCG GTCTGCAGAA GCAGGTCGAT GCCGGTCAGC TCACCAAGGA CGCGGCGATT
GCCGAATTCG CCAAGCGCGC CAACACGATG ACGTTCGACA ACGGCGCCGG CTATTTCTTC
GCCTACACCA TGGACGGGAT CACCATCGCG CATTCCGATC CCAAGGCACT CGGCACCTTT
CGCCTCGACA CCCAGACCAA CGGCCGCGCG ATCTCGCGCG AACTGCGTGA CGGCGTGGCC
GCCAAGGGCG AGTTCTTGCT GAGCTACGAA TTCATGAAGC CTGGCGAGAA GCAGCCGACC
CGCAAGCTCG GCTACGCCGT GGCCATTCCC GGCTGGAATA TGTTCGTCGG CACCGGGGCC
TATCTGGACG ACCTCGACGC CAAGTTGCAG CCGATCATGT GGGCGCTCGG TCTGGCGTTC
CTGGCCATCG CGGTGTTCGC AGGTTTGATC GCGCTGCTGA TCGGCCGCAG CATCACCGGG
CCGCTCGGCC AGCTCGGCGC GCGGATGCGC TCATTGGCCG ACGGCCGGCT GGACGACGAC
ATTCCCGGCA TCGCCCGCGG CGACGAGGTC GGCAAGATGG CCGCCACCGT GCAGGTGTTC
AAGGACAACG CGATCCGGAT CCGCGGCCTG GAGCAGGTCG AGGCCGAGGC GCAACAGCGC
GTCGCGGCGG CGCGCCGCGC CGAGATGGAG AGCCTCGCCG ACGATTTCGA GCGCAGCGTT
TCGGGCATCG TCCGCTCGGT GTCGGCGGCG GCGCAGGGCA TGCAGTCGAC CGCGCAGTCG
ATGACCGCGA CCGCGACCGA CGCCTCGTCG CGCGCCGCCA CGGTCGGCGC CGCGTCTGAA
AATGCTTCCA CCAATGTCGG CACCGTGGCC TCGGCCGCCG AAGAACTGTC TGCCTCGGTC
ACCGAGATCG CCCGCCAGGT CAGCCAGTCG CGCGAGATCG CCAGCCGCGC GGTCGGCGAC
GCCGAGCAGA CCAACGAGAC CGTGAAGCTG CTGTCGATCG GCGCCGAGAA GATCGGCGAA
GTGGTGCAGC TGATCCACTC GATCGCATCG CAGACCAATC TGCTGGCGCT GAACGCCACC
ATCGAAGCCG CCCGCGCCGG CGAGTCCGGC CGCGGCTTTG CCGTGGTGGC CTCCGAAGTC
AAAGCGCTGG CGAGCCAGAC CGCCAAAGCC ACCGAGGAAA TCTCGACGCA GGTTTCGGCG
ATGCAGGCCT CGACCTCCGA CGCGGTGAAA TCGATCGGCG GCATCACCGG CACCATTGCG
CAGATGAGCG AGATCACGCT GGCGATTTCC GGCGCCGTGG AAGAGCAGGG CGCCGCGACC
CGCGAGATCG CCCGCAACAT CCAGTCGGTC GCGGCGGGCT CCAGCGAGAT CTCCAATCAC
ATCGGCGGCG TCGCAGCGGC TGCGGAAGCC ACCGGCAGCG CGGCCTCGGA AGTGCTGTCG
AATGCCCGCG AACTCGACAG CCAGTCCGGC CTGCTGCGCG TCGCGGTCGA CGAGTTCCTC
GGCAAGGTTC GCGCGGCGTA A
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| Protein sequence | MSNSSGRLCR YCDAARPAAV AGDIAVKFNN LTITPKLGIL VGVTLLGLCA AGVLAGSMMQ
REMLNARIEQ TKTVVEVART MAIGLQKQVD AGQLTKDAAI AEFAKRANTM TFDNGAGYFF
AYTMDGITIA HSDPKALGTF RLDTQTNGRA ISRELRDGVA AKGEFLLSYE FMKPGEKQPT
RKLGYAVAIP GWNMFVGTGA YLDDLDAKLQ PIMWALGLAF LAIAVFAGLI ALLIGRSITG
PLGQLGARMR SLADGRLDDD IPGIARGDEV GKMAATVQVF KDNAIRIRGL EQVEAEAQQR
VAAARRAEME SLADDFERSV SGIVRSVSAA AQGMQSTAQS MTATATDASS RAATVGAASE
NASTNVGTVA SAAEELSASV TEIARQVSQS REIASRAVGD AEQTNETVKL LSIGAEKIGE
VVQLIHSIAS QTNLLALNAT IEAARAGESG RGFAVVASEV KALASQTAKA TEEISTQVSA
MQASTSDAVK SIGGITGTIA QMSEITLAIS GAVEEQGAAT REIARNIQSV AAGSSEISNH
IGGVAAAAEA TGSAASEVLS NARELDSQSG LLRVAVDEFL GKVRAA
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