| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4100 |
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| Symbol | |
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| ID | 3973189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4556373 |
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| End bp | 4558052 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927204 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_533945 |
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| Protein GI | 90425575 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCT GGCAACGCAA TTCCGACGCC GATAGTGCTG CGGCGCAACT CGAGGCGATC
GGGCGATCGC AGGGCGTCAT CGAGTTCGGC ATGGACGGCA GCATCCTCAC GGCCAACCGG
AATTTTCTCG ACGTGCTGGG CTACACGCTG GCGGAAATTC AGGGCAAGAA TCACAGCCTG
TTCGTCGATC CGGCCGAGCG CGGCAGCGCC GCGTATCGCG GGTTCTGGGC GGCGTTGCAG
CGCGGCGAAT TCCAGGCGGC GGAGTACAAG CGGATCGGCA AGGCCGGCAG GGAAGTCTGG
ATTCAGGCCT CCTACAATCC GATCCTCGGC CGCGACGGCA AGCCGTTTCG AATCGTCAAA
TTCGCCACCG ACATCACCGC GCGGAAACTC CGCAGCATGG AAGACGCCGG CAAGATCGCC
GCGATCCAGC GCGCGCAAGC CGTGGTCGAA TTCAAGCTCG ACGGCACCAT CATCACCGCC
AACGACAATT TCTTGAAGGC GATGGGCTAC ACGCTCGACG AAATCGCCGG CAAAAATCAC
AGCATCTTCG TCGAGTCTGC GACCCGCGAC GGCGCGGCGT ATCGCGAGTT TTGGGCGGCG
CTGAACCGCG GCGAATATCA GGCCGCCGAA TACAAGCGGA TCGGCAAGGC CGGCCGCGAG
GTCTGGATTC TTGCGACCTA CAATCCGATC ATCGACGAGA CCGGCAAGCC GATCAAAGTC
GTCAAATTCG CCACCGACGT CACCGCGCAA AGGCTCGGCA CCGCCAATCT CGCCGGTCAA
GTCGAAGCGA TCGGCAAGTC GCAAGCGGTG ATCGAATTCG GCATGGACGG CACTATCCTC
ACGGCCAACG ACAATTTTCT GAACGCGATG GGCTACACGC TGTCCGAGAT CAAGGGCCGC
CACCACAGCA TCTTCGTGGA GCCGGCCGAG CGCGACAGCC CGGCCTACGG CGCGTTCTGG
GCCGGGCTCA ACCGCGGCGA ATTCCAAGCC GCCGAATACA AGCGGATCGG CAAGCACGGC
CGCGAGGTCT GGATCCAGGC GTCCTACAAT CCGATCCTCG ATCTCAACGG CAAGCCGTTC
AAGGTCGTCA AATACGCCAC CGACACCACC GCGCAGGTGA TCGCCCGGCT GAAAAGCGAC
CGGGTCCGCG CCATGATGGA GTCGGTCGCC GCGGGGGCCG AGGAATTGAA CGCCTCGGTG
CGCGAGATTT CCGAGGCGAT GACCAAATCG CGCAACACCG CGATGTCGGC CGTCAGCAAG
GTGGAATCGG CGGACGAACA GGCGCAGCGC CTCAGCGTCG CCGCGCAGGC GATGGGCGGC
ATCGTCGACC TGATCGGCAA CATCACCGGT CAGATCAATC TGTTGGCGCT CAACGCCACG
ATCGAATCCG CGCGCGCCGG CGAAGCCGGC CGCGGCTTCG CGGTGGTGGC GTCCGAGGTG
AAGAGCCTCG CCAACCAGGC CAAGCAAGCC ACCGACAGGA TCGGTAGCGA GATCGCCGGC
CTGAACGGCA TTTCCGGCGA TGTGATCAGC GCCCTGCTTG CGATCAAGAC GGAAATCCAG
AACGTCAGCG AATACGTCAC CGCCACCGCG GCGGCGGTCG AGGAGCAGAG CACGGTGACC
AGCGAGATGT CGTCCAGCAT GCAGCGCGCC GCCGCCGAAG CCGCCAGCAT CGGGCGCTAA
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| Protein sequence | MSFWQRNSDA DSAAAQLEAI GRSQGVIEFG MDGSILTANR NFLDVLGYTL AEIQGKNHSL
FVDPAERGSA AYRGFWAALQ RGEFQAAEYK RIGKAGREVW IQASYNPILG RDGKPFRIVK
FATDITARKL RSMEDAGKIA AIQRAQAVVE FKLDGTIITA NDNFLKAMGY TLDEIAGKNH
SIFVESATRD GAAYREFWAA LNRGEYQAAE YKRIGKAGRE VWILATYNPI IDETGKPIKV
VKFATDVTAQ RLGTANLAGQ VEAIGKSQAV IEFGMDGTIL TANDNFLNAM GYTLSEIKGR
HHSIFVEPAE RDSPAYGAFW AGLNRGEFQA AEYKRIGKHG REVWIQASYN PILDLNGKPF
KVVKYATDTT AQVIARLKSD RVRAMMESVA AGAEELNASV REISEAMTKS RNTAMSAVSK
VESADEQAQR LSVAAQAMGG IVDLIGNITG QINLLALNAT IESARAGEAG RGFAVVASEV
KSLANQAKQA TDRIGSEIAG LNGISGDVIS ALLAIKTEIQ NVSEYVTATA AAVEEQSTVT
SEMSSSMQRA AAEAASIGR
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