Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4073 |
Symbol | |
ID | 3973354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4525515 |
End bp | 4526945 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637927177 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_533918 |
Protein GI | 90425548 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCGT TGAAGTTGTT GGCCCTGCTC GCGGGGCTGT CCGCTTGCGC GCTCACGCCA CGCGCGGCGC AAGCCGAAGC GCTGCTGCTG ATCGAAGCCG ATACCGGCAA GGTGCTGCAG GCTGAGAACG CCACCTATCC GTGGTATCCG GCCTCGGTGA CCAAGCTGAT GACCGCCTAT GTCACGCTGA AGGCGATCAA GGAAGGGCGC ATCACGCTCG ACACGCTGCT GACGGTATCG CCGACCGCGG CCTCGCAGTC GCCCTCGAAG ATGGGATTTC GCGCCGGCAC CCAGCTCACC GTCGACAACG CCTTGAAGAT GATGCTGGTG AAGTCGGCCA ACGACATGGC TGTGGTGCTC GCCGAAGGCG TCGGCGGTTC GATCGACGGC TTTTCGGCGA TGATGAACGA CAACGCGCAG CGGCTCGGCA TGACCCAGAC CTCCTACGTC AATCCCAACG GATTGCCGGC CGACGGCCAG ATCACCTCGG CGCGCGATCT CGGCATTCTC GCCCGCGCCA TCATCCGCGA CCTGCCGGAA TACGAGTATT TCGTCCATAT CCCGTCGATC CGTTTCGGCA AACGGGTGAC GCAGAATTTC AACCGGCTGA TCGGCCGCTA TCCCGGCGCC GACGGCTTCA AGACCGGCTT CATCTGCGCC TCCGGCTTCA ACCTGGTGGC GTCGGCGACC CGCGACGGCA AGCGGCTGAT CGCGGTGGTG CTCGGCGCGC CGTCGTCGCA GGCCCGCGCG CTGAAAGCCG CGCAATTGCT GGAGCGCGGG TTTTCCGCCA ACCAGCTGAC CTGGCTGCGC CCGGCGCTCG GCACCGTCGA CAACCTGGCG CCGATCGACG CCGCACCGCC GAATTTGCGC GACGAGATGT GCGGGCCGAA ACGCAAGCGC CCGGCCAGCG ATGAATCCGA GGAAGACAAC ATCGCCAGCG CGACCGGCGA GAGCGCCATG AGCTTCTTCA GCGCCGGGCT GCAGCCGCCG GCCTTGCGGC CGGTGGATAT GCTCGCCGCA GCCCCCGCAC CGTCCGAGCC GATCGTGGTT TATACCGGGC CGAAGAAGAC CGGCGCCGAA CTGATCGCCG CGGTCGCGGT CGAGGCGCAG AAGCAAACCC CGAAGCCGCG CGGCAAGAAA ACCCTCGCCG CCAAGAAGCC GGATGGCGCC GCCGACGCCA AGGACAGCAA ATCAGCCGGT TCGGACGGCC GGGTGTCGCT GACCATCGAT CCGAAAGCTG CGCCGAAGCC GGCGCATGCC GGCAAGCAGG TCCACGCCAA ACCTGACGCG GCGGCGGTGA AGCCCGCCGA GAAGCCCGCC GCCTCGGCGA CAGCCAAACC GGCCGCCAAG GATAAGCCGA AGGCGGCCAG CAAACCGACG CCGAAGGCGA ATACCACCGG CGACGCCAAG CCAGCCGACC CGAAGACCTA A
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Protein sequence | MPSLKLLALL AGLSACALTP RAAQAEALLL IEADTGKVLQ AENATYPWYP ASVTKLMTAY VTLKAIKEGR ITLDTLLTVS PTAASQSPSK MGFRAGTQLT VDNALKMMLV KSANDMAVVL AEGVGGSIDG FSAMMNDNAQ RLGMTQTSYV NPNGLPADGQ ITSARDLGIL ARAIIRDLPE YEYFVHIPSI RFGKRVTQNF NRLIGRYPGA DGFKTGFICA SGFNLVASAT RDGKRLIAVV LGAPSSQARA LKAAQLLERG FSANQLTWLR PALGTVDNLA PIDAAPPNLR DEMCGPKRKR PASDESEEDN IASATGESAM SFFSAGLQPP ALRPVDMLAA APAPSEPIVV YTGPKKTGAE LIAAVAVEAQ KQTPKPRGKK TLAAKKPDGA ADAKDSKSAG SDGRVSLTID PKAAPKPAHA GKQVHAKPDA AAVKPAEKPA ASATAKPAAK DKPKAASKPT PKANTTGDAK PADPKT
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