Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4043 |
Symbol | |
ID | 3969292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4490891 |
End bp | 4492027 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637927147 |
Product | hypothetical protein |
Protein accession | YP_533888 |
Protein GI | 90425518 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTTCAG AACCGCTGCT CGACACGATC AGCACAGGCG ATGGTTTGTT ACTGCGTCCG ACCGGATCAT GGACGGCGGT GCATGCCGCG GCGCTCGAGC ATTTGTTCGA CGTCGTCGCG CCGCAGTTGC GGCAGGCCAA GGCGCTGACG ATCGACCTTG CCGAACTGCA TGAAATCGAC ACCCTCGGTG CCTGGCTGTT GGAAAAGATC TCGCGCCGCG CTGCCCAGGC AGGGCATCCC GCCAGCGTGG TCGGCGCCGC CGAGCGCTAT GCCGGGCTGA TCGACCAGGT GCGGCAAGTC AACCGCCGGC AGCCGGCCAA TGCGGTGCGC GGAAGCCTGA TCCTGACGCG ACTCGAAGAC ATCGGCCGGG CCACCTGGGG CGCGCGCGAA GACCTGTTCG CCTTCCTGCA GATGACGGGC GCGCTCGCCA ACGCGTTGCT CGGCGTGCTG CGCCGGCCGC GCTCGTTGCG GCTGACGTCG CTGGTCTATC AGATCTATCG GGTCGGTTGG CAGGCGATCC CGATCATCGG GCTGATCACC TTCCTGATCG GCGCGATCAT CGCCCAGCAG GGCATCTTCC ATTTTCGCAA GTTCGGGGCG GAGTCCTATG TCGTCGACAT GGTGGGCATC CTGGTGTTGC GCGAACTCGG CGTCTTGATC GTGGCGATCA TGGTGGCCGG GCGATCCGGC AGCGCCTACA CCGCCGAACT CGGCTCGATG AAGATGCGCG AGGAGATCGA CGCGCTGTCG ACCATGGATC TCGATCCGGT CGAGGTGTTG ATCCTGCCGC GGGTGATCGC GCTGATTATC GCGCTGCCGA TCCTGGCTTT CCTGGGCGCG ATGGCGGCGC TGTACGGCGG CGGGCTGGTC GCTTGGTTCT ATGGCGGCAT GAGTCCGACC ATCTTCATCG CGCGACTGCA CGAGGCGGTC TCGATCACTC ATTTCGAGGT CGGCATCATC AAGGCGCCGT TCATGGCGCT GGTGATCGGC ATCGTCGCCT GCAGCGAAGG CTTGCGGGTC ATGGGCAGCG CGGAATCGCT CGGCCGGCAG ACCACCGCCT CGGTGGTGAA GTCGATCTTC TGCGTGATCG TGCTCGACGG GCTGTTCGCC GTGTTCTTCG CCTCGATCGG AATGTAG
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Protein sequence | MSSEPLLDTI STGDGLLLRP TGSWTAVHAA ALEHLFDVVA PQLRQAKALT IDLAELHEID TLGAWLLEKI SRRAAQAGHP ASVVGAAERY AGLIDQVRQV NRRQPANAVR GSLILTRLED IGRATWGARE DLFAFLQMTG ALANALLGVL RRPRSLRLTS LVYQIYRVGW QAIPIIGLIT FLIGAIIAQQ GIFHFRKFGA ESYVVDMVGI LVLRELGVLI VAIMVAGRSG SAYTAELGSM KMREEIDALS TMDLDPVEVL ILPRVIALII ALPILAFLGA MAALYGGGLV AWFYGGMSPT IFIARLHEAV SITHFEVGII KAPFMALVIG IVACSEGLRV MGSAESLGRQ TTASVVKSIF CVIVLDGLFA VFFASIGM
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