Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3978 |
Symbol | |
ID | 3969401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4432899 |
End bp | 4434524 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637927082 |
Product | hypothetical protein |
Protein accession | YP_533823 |
Protein GI | 90425453 |
COG category | [S] Function unknown |
COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.346542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGCTG GATTCGCACG TCGTTTCTTG ACGCTGACAT CGACCCGCGC CGGGGTTCGG GCCGGATTGG CGTCGTTGTT GCTGCTCGCA GGCGCAGGCT CCGTCCACGA CGCCACCGCG CTAGGCGACA CCCGCACCCT CTCCTTCCAC CACACCCATT CCGACGAGAA CCTCACCGTC ACCTTCAAGC GCAACGGCCG TTACGACGAA GCCGCGCTGC GAGAGATCAA CCACTTCCTC CGCGACTGGC GCAGCCAGGA CCAGACCACG ATGGACCGTC GGCTGTTCGA CATCCTCTGG GAAGTCTACC GCGACGTCGA CGCCAAGCAG CCGATCCAGA TCATCTCCGC CTATCGCTCC CCCGCCACCA ACGCCATGCT GCGCCGCCGC TCGTCGGGCG TTGCCCGGGC CAGCCAGCAC ATGCTCGGCC AGGCGATGGA TTTCTACATT CCCGGCGTGG CGCTGGAGCA GATCCGCTTC GCCGGGCTGC GGCTGCAGCG CGGCGGCGTC GGCTTCTATC CGACCTCGGG TTCGCCGTTC GTGCATCTCG ACACCGGCAA CATCCGACAC TGGCCGCGCA TGAGCCACGA CCAGCTGGCC CGCGTATTCC CCAACGGCCG CACCGTGCAC GTGCCGTCCG ACGGCAATCC GCTTCCCGGC TATCAGCTGG CGTTAGCCGA TATCGAGAAA CGCGGCGGCG CGTCGGATGC CACCGGCAGC GGCCCGACCG GCTTCCTGGC CTCGCTGTTC GGCAAGAGCA AGTCCGGCAG CGACGAGGAT GACGAGGGCG GTGCCGCCCC GGCCGTGGTC GCCAGCGCCG ACGCCGCCTC GCCGGCCGGC CTGATGGCCG CAGCCCCCGG CAACATCAAG AACGCCCTGG TCAAGATCAT CGACAACGTG CCGCTGCCGC GCGCCAAGCC GCCCGCAGTG GCCGCCTTCC AGGTGGCCTC GGCGGACGTC CCGCCCGCTC CGATCGCGAA GCCGGTCGCC GAGAAGGCCG ACACCAAGCA AGACCCGAGC AAGCCGCAAT CGCCCGCCGA CATCATCAAC GCCCGCGGCT TCTGGGACGA CATGCCGGCA ACCAAGCAGG CGACGCCGGC GCAGGTCGCC GCGATCAGCG CCCGCCAGGC GCTCGCCGCC GCCGACCCGC AATCCACCGC CACCATTTCC GAAAGCACGA TGCAGGCGAT GGCCTATGCG CCGCCGCCGT CCGAGCGCGC CCAAGTTGTC GCCGCCAGCG CGCCGGTGCC GCGCAGCGTG CGACCGGCGC AGCCGGCGCG CAATCAGATG GCGATCAACA ACGTCACCAC GGTGGTCGCC AAGGGCCAGC GCGGCCACGG CGCGGTGGTC GCGACCTCGT CGCGGCTCGC CGCCGCGGCG GTCAAGGACA ACGACGTCTG GATGCGCGCG ATGATCCTGG CGCCGAGCGC CTCGACCATG ACCTCCACGG TGTTCGGCGA CACCGACCTC ACCATCCTGC GCGCGCATTT CAGCAAGCCG CAGGCGGCCG TCGCCATGGC GTTCGCCGAC GATCCGCAGT CCGGCATGCA GTGCGAACAG TTCACCGGCG CCGCCGTGGT GACGCTGTCG ACCACGCCGT TCACCCGCAC CGCGGCGCTG CGCTGA
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Protein sequence | MLAGFARRFL TLTSTRAGVR AGLASLLLLA GAGSVHDATA LGDTRTLSFH HTHSDENLTV TFKRNGRYDE AALREINHFL RDWRSQDQTT MDRRLFDILW EVYRDVDAKQ PIQIISAYRS PATNAMLRRR SSGVARASQH MLGQAMDFYI PGVALEQIRF AGLRLQRGGV GFYPTSGSPF VHLDTGNIRH WPRMSHDQLA RVFPNGRTVH VPSDGNPLPG YQLALADIEK RGGASDATGS GPTGFLASLF GKSKSGSDED DEGGAAPAVV ASADAASPAG LMAAAPGNIK NALVKIIDNV PLPRAKPPAV AAFQVASADV PPAPIAKPVA EKADTKQDPS KPQSPADIIN ARGFWDDMPA TKQATPAQVA AISARQALAA ADPQSTATIS ESTMQAMAYA PPPSERAQVV AASAPVPRSV RPAQPARNQM AINNVTTVVA KGQRGHGAVV ATSSRLAAAA VKDNDVWMRA MILAPSASTM TSTVFGDTDL TILRAHFSKP QAAVAMAFAD DPQSGMQCEQ FTGAAVVTLS TTPFTRTAAL R
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