| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3865 |
|---|
| Symbol | |
|---|
| ID | 3969132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4296134 |
|---|
| End bp | 4296952 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637926973 |
|---|
| Product | phosphonate ABC transporter ATP-binding |
|---|
| Protein accession | YP_533715 |
|---|
| Protein GI | 90425345 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02315] phosphonate ABC transporter, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGAA TCCAGGCGCT GACCAAGACG TACAAGAACG GCGAAGCCGC CTTAAGAGGC
GTCTCCCTAT CTGTTGGAGC GGGAGAGATC ATCGGCCTGA TTGGCCCGTC GGGGGCGGGC
AAGTCGACGT TGATCCGTTG CGTCAACCGG CTGATCGAGC CGAGCTCGGG GCGGGTGCAG
CTCGGCGAGG TGGAACTCAC CGGCCTTTCT AGCGGCGCGC TTCGCCGCGA ACGTCGTCGG
ATTGGCATGA TCTTCCAGGA GTACGCGCTG ATCGAGCGCC TCACCGTCAT GGAGAACGTG
CTCGCCGGCC GGCTCGGCTA CACCGGGTTC TGGAACAGCT GGTTCCGACG CTTCGCCGAG
CAGGACATCC AGCGTGCGAT TGCGCTCCTC GAACGCGTGG GACTGATCGA CCACATCGAC
AAGCGCGCTG ATGCGCTGTC GGGCGGCCAG CGTCAGCGCG TGGGCATCGC GCGCGCGCTG
ATTCAGCAGC CGGAATTGTT GCTGGTCGAT GAGCCGACGG CGAGTCTCGA TCCCAAGACG
TCCCGGTCGG TGATGCGGCT GCTGACGGAA TTGTGCATCG AGAACCGGCT GGCGGCGATC
GTCAACATCC ACGACGTGGT CCTTGCCCAG GCGTTCCTTC CCCGAATCGT CGGGCTCAAT
GCCGGTATCG TCGTCTATGA TGGCCCTGCC AGCGGGTTAA CCGCCGAGGT GTTGACCTCC
ATCTATGGCG AGGAGGATTG GACCCGGACT GCGGCGGGGG ATGGCGGGAC TGACGATGGG
GAGCCCTTGA TCATCGCGCG GATGGAAGCC GCGCAGTGA
|
|---|
| Protein sequence | MLRIQALTKT YKNGEAALRG VSLSVGAGEI IGLIGPSGAG KSTLIRCVNR LIEPSSGRVQ
LGEVELTGLS SGALRRERRR IGMIFQEYAL IERLTVMENV LAGRLGYTGF WNSWFRRFAE
QDIQRAIALL ERVGLIDHID KRADALSGGQ RQRVGIARAL IQQPELLLVD EPTASLDPKT
SRSVMRLLTE LCIENRLAAI VNIHDVVLAQ AFLPRIVGLN AGIVVYDGPA SGLTAEVLTS
IYGEEDWTRT AAGDGGTDDG EPLIIARMEA AQ
|
|---|
| |