Gene RPC_3836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3836 
SymbolgreA 
ID3969449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4268187 
End bp4268663 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content64% 
IMG OID637926947 
Producttranscription elongation factor GreA 
Protein accessionYP_533689 
Protein GI90425319 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.722398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA AGGTACCAAT GACCGCGGGC GGTTATGCCG CCCTCGAAGT CGAATTGAAG 
CAGCGCCAGT CGGTGGATCG TCCGCGAATC ATCGAGCACA TCGCCGAGGC GCGCTCGCAT
GGCGACCTTT CGGAAAATGC CGAGTACCAC GCCGCCAAGG AAGAGCAGTC GCACAACGAG
GGCCGCATCG CGGAGCTCGA GGACAAGCTG GCGCGCGCCG ACATCATCGA CATCAGCAAA
CTCTCCGGCG ACACCATCAA GTTCGGCGCC ACCGTCACCT TGATCGACGA GGACACCGAG
AAGAAAGCGG TGTGGCAGAT CGTCGGCGAG CCGGAAGCCG ACGCCAAGAA GGGCCGCATC
TCGATCACCT CGCCGCTGGC GCGGGCGCTG ATCGGCAAGA AGAAAGGCGC TTCCGTCGAG
GTCGTCGCCC CCGGCGGCGC CAAGGCCTAC GAGATCACCA AGGTCGAGTG GCGCTGA
 
Protein sequence
MIEKVPMTAG GYAALEVELK QRQSVDRPRI IEHIAEARSH GDLSENAEYH AAKEEQSHNE 
GRIAELEDKL ARADIIDISK LSGDTIKFGA TVTLIDEDTE KKAVWQIVGE PEADAKKGRI
SITSPLARAL IGKKKGASVE VVAPGGAKAY EITKVEWR