Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3836 |
Symbol | greA |
ID | 3969449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4268187 |
End bp | 4268663 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637926947 |
Product | transcription elongation factor GreA |
Protein accession | YP_533689 |
Protein GI | 90425319 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.722398 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAA AGGTACCAAT GACCGCGGGC GGTTATGCCG CCCTCGAAGT CGAATTGAAG CAGCGCCAGT CGGTGGATCG TCCGCGAATC ATCGAGCACA TCGCCGAGGC GCGCTCGCAT GGCGACCTTT CGGAAAATGC CGAGTACCAC GCCGCCAAGG AAGAGCAGTC GCACAACGAG GGCCGCATCG CGGAGCTCGA GGACAAGCTG GCGCGCGCCG ACATCATCGA CATCAGCAAA CTCTCCGGCG ACACCATCAA GTTCGGCGCC ACCGTCACCT TGATCGACGA GGACACCGAG AAGAAAGCGG TGTGGCAGAT CGTCGGCGAG CCGGAAGCCG ACGCCAAGAA GGGCCGCATC TCGATCACCT CGCCGCTGGC GCGGGCGCTG ATCGGCAAGA AGAAAGGCGC TTCCGTCGAG GTCGTCGCCC CCGGCGGCGC CAAGGCCTAC GAGATCACCA AGGTCGAGTG GCGCTGA
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Protein sequence | MIEKVPMTAG GYAALEVELK QRQSVDRPRI IEHIAEARSH GDLSENAEYH AAKEEQSHNE GRIAELEDKL ARADIIDISK LSGDTIKFGA TVTLIDEDTE KKAVWQIVGE PEADAKKGRI SITSPLARAL IGKKKGASVE VVAPGGAKAY EITKVEWR
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