Gene RPC_3820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3820 
Symbol 
ID3969279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4251678 
End bp4252046 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content63% 
IMG OID637926930 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_533673 
Protein GI90425303 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA CCCAAGCCTT CAGTTTTGAA GCTGCCCACC GTTTGCCCCA CGTGCCGGCG 
CAGCACCGCT GCCACCGCAT GCACGGCCAT TCCTATCGGG TCGAGCTGCA ATTGCGCGGA
CCGGTCGATC CAACCAGCGG CTTCGTGGTG GATTTCTTCG AGATCGAGGC AGCGTTCGGC
CCGGTGCTGG CCAGCCTCGA TCATTATTGC CTGAACGAAG TCGACGGCCT GGAGAATCCG
ACCGCGGAAA ACATCGCGCT GTGGATCTGG CAACGGGTCA AGCCGGCGCT GCCGCAGCTG
TCGCAGGTCA AGGTGTTCGA AACCGCCGAT TGCTGGGCGG AGTATGATGG CGACGCGGCG
ACGGCCTGA
 
Protein sequence
MKITQAFSFE AAHRLPHVPA QHRCHRMHGH SYRVELQLRG PVDPTSGFVV DFFEIEAAFG 
PVLASLDHYC LNEVDGLENP TAENIALWIW QRVKPALPQL SQVKVFETAD CWAEYDGDAA
TA