| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3814 |
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| Symbol | |
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| ID | 3969273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4245090 |
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| End bp | 4246439 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926924 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_533667 |
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| Protein GI | 90425297 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.156886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCTG CTTTGGAAAA ATACGCCAAG AGTTCGGTGC CGCGCTACAC CAGCTATCCC
ACCGCACCGC ATTTTGCCGC GGAGTTTCCC GAATCGATCT ATCGCGGCTG GCTGGCGCAG
CTCGACCTCG ACGAGCCGAT TTCGCTGTAT CTGCACGTGC CGTTCTGCAA GCAGATGTGC
TGGTACTGCG GCTGCAACAT GAAGCTCGCC TCGCGCTATG AGCCGGTTGC CACCTATCTG
CAGCACCTGC TCGACGAGAT CGACCTTCTG GCCAACGCCA TGCCGGGCCG GATGCCGGTC
GGTCACGTGC ATTTTGGCGG CGGCACCCCG ACGGTGCTCG AGCCGGACGA TCTCGGCGCG
GTGATGGCGC TGATCGCCGA TCGCTTCCGC CTGATCGAGG GCGCTGAGAT CGCAATCGAA
AGCGATCCGC GCACCTTGAC CGACGACATG GTCGACAAGA TCGGCGCGAT CGGCTTCACC
CGCGCGAGCT TCGGCGTGCA GGAGTTCGAC CCCAAGGTGC AGGCCGCGAT CAACCGGATC
CAGCCGCCCG AGATGGTCAA GCACGCGATG GACCGTTTCC GTGCGGTCGG CGTCAAAAAA
CTCAATTTCG ACCTGATCTA CGGGCTACCC TATCAGACTG CGGAGGATCT GCGCCGCACC
GTCGAACAAT GCGTCGAGAT GCGGCCGGAC CGCGTCGCGC TGTTCGGCTA CGCCCATGTG
CCGTGGGTCG CCAAGAACCA ACGGATGATT CCGGACGAAT CGCTGCCGGA ACCGGCGCAG
CGCGCCGAGC AGGCCCGCGC CGCCGCCGAC GCCTTGGTCA AGGGCGGTTA CGTGCGGATC
GGCATCGACC ATTTCGCGCT GCCCGGCGAT ACGCTGGCGG TGGCCGCAGC GACCGGCGAG
CTGCACCGCA ACTTCCAGGG CTACACCCCC GACGCCTCGC CCACCCTGAT CGGCATCGGC
GCCACCTCGA TCGGCCGCAC GCCGTCGGGC TATGTGCAGA ACATCAGCGA GACCGGCGCC
TATATGCGCG CGGTCGAAGC CGGCAAGTTG CCGATCGCCC GCGGCCACGC CTTCAAGGGC
CAAGACGACC TGCGCGCCCA CGTCATCGAG CGCATCATGT GCGACGGCAA GGTCGACCTC
AACGCTGTGG GGCGGATCTT CGGCGCCGCC GAGGACTGGT ACGACGGCGA ACGCGAGGCA
ATCGCAGAGC TACAGAAGGA CGGTGTGTTG ACCTGCGCCA ATGGCACGCT GACGCTCACT
CCCGCCGGCG AGCCGCTCGC CCGCGTCGTC GCCGCGGTGT TTGACACTTA TTTGCGCAAC
TCCTCCGTCC GCCATTCGAT CGCGGTCTGA
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| Protein sequence | MTSALEKYAK SSVPRYTSYP TAPHFAAEFP ESIYRGWLAQ LDLDEPISLY LHVPFCKQMC
WYCGCNMKLA SRYEPVATYL QHLLDEIDLL ANAMPGRMPV GHVHFGGGTP TVLEPDDLGA
VMALIADRFR LIEGAEIAIE SDPRTLTDDM VDKIGAIGFT RASFGVQEFD PKVQAAINRI
QPPEMVKHAM DRFRAVGVKK LNFDLIYGLP YQTAEDLRRT VEQCVEMRPD RVALFGYAHV
PWVAKNQRMI PDESLPEPAQ RAEQARAAAD ALVKGGYVRI GIDHFALPGD TLAVAAATGE
LHRNFQGYTP DASPTLIGIG ATSIGRTPSG YVQNISETGA YMRAVEAGKL PIARGHAFKG
QDDLRAHVIE RIMCDGKVDL NAVGRIFGAA EDWYDGEREA IAELQKDGVL TCANGTLTLT
PAGEPLARVV AAVFDTYLRN SSVRHSIAV
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