Gene RPC_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3798 
Symbol 
ID3969218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4222647 
End bp4225241 
Gene Length2595 bp 
Protein Length864 aa 
Translation table11 
GC content65% 
IMG OID637926908 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_533651 
Protein GI90425281 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCACC GCGTTGACCC GGCCATGAAG CCGAGTTCCA AACGATTGCT CGGCGTGCTG 
TTCCTGACCA GCTTCAGCTT GATCGCCGCC ATCGTCGGCA CCAACCTGTT CGTGATGAAT
AATCTGCGGG AAAGCACGCT GCGCACCGCG GAAATCAACC TCGCCCGCTA CAGTCTCACG
CTCGCGGAAG AGGCGGACCG CTCGTTCAAA TCGCTGGATC TGGTGCTGTC GAGCGTCGGC
GACTATCTCG GTCGTCGCGG CGTGACCGAC AGCGCCTCCT ATCAGCAAAC GATGTCCGAT
CAGGAAACCC ACCTGATGCT GCGGGAAAAG ATCACCGGGC TGCCGCAGGT GGACGCCGTG
ACCATGATCA ATGAACGCGG CAAGCTGATC AATTTCTCGC GCTACTGGCC GATTCCCGAC
GTCGATATCT CCGATCGCGA TTATTTCCGC GCGCTGCAGG CCGACGCCAA TCTGGAAACC
TTCATCAGCG CGCCGGTCCA AAACCGCGGC ACCGGCACCT GGAACATCTA CATTGCGCGC
CGGCTGAACG ACCCCAACGG CGCCTTCATG GGGTTGCTGC TCGGCGCGAT GTCGCTGCAG
TATTTCGAGA ATTTCTTCGG AGCCACATCG CCCGGTGTCG GCACCGCGGT GTCGCTGGTG
CGCGACGACG GCCTATTGCT GGCGCGCTAT CCGGCATCCG ATCGGATCGG CAAGATTTCC
TCAGGCGCCG GGCAGCGGGC GTTGGCGGCC GGCGGCAGCC TGCGCGAAGC CGGCGACACG
GATCAGCAGA TGCGGCTGCA CGCGGCGCGC ATGCTGCCGA ACTATCCGGT GCTGATCGCG
GTGAGCCAAA CCGAAGTCAG CGCCCTGCAG AGCTGGCGCA GTATCGCGGC CTTGATCGTG
GCGATGTCGT CGCTCACCGC CATCGTGCTC TTGATCGTCA CCGTGGTGAT CGCCCGCTGG
TGGATCAGAC AGGACCAATT GATCAGCGAC GCCCAGTCGG CGAACGCCGC GAAGTCCACC
TTTGTGGCGA TGATGAGTCA CGAAATTCGC ACGCCGATGA ATGCGGTGCT CGGGCTCGCC
ACCAACCTGC TCGACAGCCG GCTCGACGCC GAGCAGCGCC GCTCGGTGGT CGGCATCCAC
GACGCCGGCG ACGCACTGCT CGACATTCTC AACGATATTC TGGATTTTTC CAAGCTGGAG
GCCGGACGGC TGTCGCTGGA ATCCATCGCT TTTTCGCCCG AGGCGCTCGT TGAAAGCGCG
CTCAGCATCG TGCTGCCCCG CGCCACCGCG CGCGGGCTGC GGGTCCGAAA CCAGATCGAT
CCGTCGCTTC CGATCGCGCT GCAAGGCGAT GCCGGCCGGA TTCGCCAGGT GCTGCTGAAC
CTGATGTCGA ACGCGGTGAA ATTCACGCCG TCCGGCGAGG TCGTGGTGAC GACGAAGTGC
CGTTGGGCGG ACGAGAGCTT CGCCGCGCTG GAGTGGATCA TCGCCGACAC CGGGATCGGC
ATCGCCGAAC AAGACATCGG CTCGCTGTTC ACCGATTTTG CCCAGGCCGA CAGCTCGATC
AGCCGGCGGT TCGGCGGCTC GGGTCTTGGG CTGGCGATCT GCAAGCGCCT GGTCGAGCAG
ATGGGCGGCG AGATCCAGGT GAGTTCGGCC TACGGCAAAG GCACCACCTT CAGGTTCAGC
CTCACGCTTC CGCTCGCCAG TCAGTTGCCG GTGCCCGACA CCGACGACCC GGTGGTCTAC
AGCGATTTCC GCCAGCGGAT CGCCGCGCTC GGCCGGCCGC TGCGGATTCT GATCGTCGAC
GACAACCCGA CCAACCGACT GGTCGCGGCG AAGATGCTGC AGGACTTCCC GACCCAGACC
AACACCGCCT CCGACGGCAA CGAAGCGGTG ACCGCCGCCA CCCGCTTCAG CTACGACGTG
ATCCTGATGG ACGTCCGGAT GCCGGAGATG GACGGACTCG AGGCCACCCG GGCGATCCGG
GCTTGCGATG GCTCAATGCA AGGCGCTCCG ATCATCGCGT TCACCGCCAA CGCCTTCGCG
GAAGACGCGA TCGCCTGTCG CGAAGCCGGC ATGAACGACT TCGTTTCCAA GCCGGTGCGC
AAGAAGGCGC TGATCGAAGC GATCCTGCGG GTGCTGCCAC GGCCCGATAC GGCCGGCGAA
CGCGCCATCG CCGCCGCAAC CGACGGCATC GACCTTGCGC CCTCGCGACA GCCAAAGCCA
GGCGTACCGG CCGCCACGAC GCTGCATGTG GCCCGCGACA CCTATGAGAC CATGGTCGAG
GAAATCGGCT GCGAGGCGAC GCTGGAGATC ATCGCCGTCT TCGTCAAGGA TACCGACGAA
CGGCTGGCGT TGTTGCGGCA GCTGTCGGTC GCGTCGCATC GCCGCGAGAT CGAACGCGAG
GCGCATTCGC TGAAGAGTGC TGCTGCCACG TTCGGACTGC ATGACCTCGC CGGGCTGGCC
CGGGAGTTGG AAAAGACCGC GCCCGTGATC ACCGAGGCCG ATTACATCGC GATGATCGGT
CGCCTCGAAA CCGCCTTCGG CGCGGCACGC GCGGCGCAGC GCCCGGACGA CGGCTGTGTG
ACGGTCTCGA TCTGA
 
Protein sequence
MCHRVDPAMK PSSKRLLGVL FLTSFSLIAA IVGTNLFVMN NLRESTLRTA EINLARYSLT 
LAEEADRSFK SLDLVLSSVG DYLGRRGVTD SASYQQTMSD QETHLMLREK ITGLPQVDAV
TMINERGKLI NFSRYWPIPD VDISDRDYFR ALQADANLET FISAPVQNRG TGTWNIYIAR
RLNDPNGAFM GLLLGAMSLQ YFENFFGATS PGVGTAVSLV RDDGLLLARY PASDRIGKIS
SGAGQRALAA GGSLREAGDT DQQMRLHAAR MLPNYPVLIA VSQTEVSALQ SWRSIAALIV
AMSSLTAIVL LIVTVVIARW WIRQDQLISD AQSANAAKST FVAMMSHEIR TPMNAVLGLA
TNLLDSRLDA EQRRSVVGIH DAGDALLDIL NDILDFSKLE AGRLSLESIA FSPEALVESA
LSIVLPRATA RGLRVRNQID PSLPIALQGD AGRIRQVLLN LMSNAVKFTP SGEVVVTTKC
RWADESFAAL EWIIADTGIG IAEQDIGSLF TDFAQADSSI SRRFGGSGLG LAICKRLVEQ
MGGEIQVSSA YGKGTTFRFS LTLPLASQLP VPDTDDPVVY SDFRQRIAAL GRPLRILIVD
DNPTNRLVAA KMLQDFPTQT NTASDGNEAV TAATRFSYDV ILMDVRMPEM DGLEATRAIR
ACDGSMQGAP IIAFTANAFA EDAIACREAG MNDFVSKPVR KKALIEAILR VLPRPDTAGE
RAIAAATDGI DLAPSRQPKP GVPAATTLHV ARDTYETMVE EIGCEATLEI IAVFVKDTDE
RLALLRQLSV ASHRREIERE AHSLKSAAAT FGLHDLAGLA RELEKTAPVI TEADYIAMIG
RLETAFGAAR AAQRPDDGCV TVSI