Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3795 |
Symbol | |
ID | 3969215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4219877 |
End bp | 4220659 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637926905 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_533648 |
Protein GI | 90425278 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCTTG GAATCAAAGG CCGCCGTGCG CTGGTGTGCG CATCCAGCAA GGGATTGGGG CGCGCCTGCG CCACCGCGTT GGCCGCGGAA GGCGTGCACG TCACCATGAC GGCACGCGGT GCCGAAGCGC TGGCGCAGGC CGCCGCGGCG TTGCGCCAGG CCTATCCCGG GGTCGAGATC ACCGAAGTCG TCGGCGACAT CACCACGCCG GAAGGCCGCG CTGCCGCGCT GAAGGCCTGC CCCTCGCCCG ACATCCTGGT CAACAATGCC GGCGGCCCGC CGCCCGGCGA TTTCCGCACC TGGACCCGCG ACGATTGGAT CAAGGCGCTC GACGCCAACA TGCTGACCCC GATCGAACTG ATCAAGGCCA CGGTGGACGG CATGATCGAA CGCAAGTACG GCCGCATCGT CAACATCACC TCGGCCGCCG TGAAGGCGCC GATCGACGTG CTCGGACTGT CCAACGGCGC ACGAAGCGGC CTCACCGGCT TCGTCGCCGG GCTGTCGCGC AAAACCGTGC GCCATAACGT CACCATCAAC GCGCTGTTGC CGGGGCCGTT CGACACCGAC CGGCTGCGCA CGGTCTCGGC CGGTCAGTCC AAGGCCAGCG GCATTCCGGT CGAGGAGATC ATGAGCAAGC GGATGAGCGA GAACCCGGCC GGGCGGTTTG GCGATCCGGA AGAGTTCGGG CTCGCCTGCG CGTTTTTGTG CGGTTCGAAA GCCGGTTTCA TCACCGGGCA GAACATCCTG CTCGACGGCG GCGCGTTTCC CGGAACGTTC TGA
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Protein sequence | MDLGIKGRRA LVCASSKGLG RACATALAAE GVHVTMTARG AEALAQAAAA LRQAYPGVEI TEVVGDITTP EGRAAALKAC PSPDILVNNA GGPPPGDFRT WTRDDWIKAL DANMLTPIEL IKATVDGMIE RKYGRIVNIT SAAVKAPIDV LGLSNGARSG LTGFVAGLSR KTVRHNVTIN ALLPGPFDTD RLRTVSAGQS KASGIPVEEI MSKRMSENPA GRFGDPEEFG LACAFLCGSK AGFITGQNIL LDGGAFPGTF
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