Gene RPC_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3787 
Symbol 
ID3969474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4210972 
End bp4212423 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content66% 
IMG OID637926896 
ProductPUCC protein 
Protein accessionYP_533640 
Protein GI90425270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCTG TCAGCCAACG AGTCATGAAG GTTTGGGCGA CGCTTGGTCC GCGCTTCCTG 
CCATTTGCCG ATGCGGCGAC GCCGGATCTG CCGCTGTCCC GGCTGTTGCG GCTTTCGCTG
TTTCAAGTCT CGGTCGGAAT GTCCCTGGTG CTGCTGGTCG GCACGTTGAA CCGGGTGATG
ATCGTCGAGC TCCACGTTCC GGCATCGATC GTCGGCGTGA TGATTTCCTT GCCGCTGATC
TTCGCGCCGT TTCGGGCGTT GATCGGCTTT CGTTCCGACA TCCACAGCTC CGTGCTCGGT
TGGAAACGGG TGCCCTTTCT CTATAAAGGC ACCATGGTTC AGTTCGGTGG ACTGGCCATT
CTGCCGTTTG CATTGTTAGT GCTGTCCGGT GGCGAAGAGG CCCGCAACGC CCCGGCCTGG
ATCGGCCAAG CCGGCTCGGC GCTGGCCTTT CTGTTGATCG GCGCCGGTTT GCACACCACG
CAGACCGTCG GCTTGGCGCT GGCGACCGAT CTCGCCAGTC CGGAATCGCG GCCCAAGGTC
GTCGGGCTGA TGTATGTCAT GCTGTTGTTC GGCATGATCG CCAGCGCGCT GATCTTCGGC
GCGCTGTTGG CGGATTTCAG CACCGGGCGC CTCATTCAGG TGATCCAGGG CGCGGCGGTG
GTCACCATCG TGCTCAACGC CGTCGCGGTG TGGAAGCAGG AGGCGCGTAG CCGCCCCGGC
GGCAAACCGG CCGCCGCGGC GCAGCGTCAG CCGTCGTTCC GCGAAACCTG GCAGGTGTTC
ATCCAGGGCG ACAACGCCAT TCGACGGCTG ATCGCGGTCG GCCTCGGCAC CATGGCGTTC
AGCATGGAAG ACGTCCTGCT CGAGCCGTAT GGCGGCCAGA TCCTGCATCT CAGCGTCGGC
GACACCACCA AGCTGACCGC GGCGCTGGCG ATCGGCGGCT TGTTCGGGTT TGGGCTCGCC
TCACGGATTC TCAGCCGCGG CGCCGATCCG TTCCGGATGG CCGGCTTCGG CGCGCTGATC
GGCATCCCGG CCTTCGCCGC GGTGATCGCC GCCGATCCCC TGGACTCGGC TTTGCTGTTC
GGGCTCGGCA CCGCGTTGAT CGGATTCGGC GCCGGGCTGT TCGGTCACGG CACCCTGACC
GCGACGATGA ATTGCGCGCC GAAGCATCAG GCCGGCCTGG CGCTCGGCGC CTGGGGCGCG
GTGCAGGCGT CGGCTGCGGG CGTCGCCATT GCCCTCGGCG GCATTCTGCG CGACTTGGTC
GCCGCGATCG CGCCGAACCA CGTTCTCGGG GCGGCCTCGG GGTACGACTT CGTCTATGGC
CTCGAGATCG TCCTGTTGTT CGCAACCCTC GTGACGATGG TGCCGCTCAT TCGTCGTGTC
GGAGTCCAAG CTGGAGCGGA GCAGAGTCCC GACCTAAGGC CGTTCAGCCG CCTGGAGACC
AAAACGGAGT AG
 
Protein sequence
MNSVSQRVMK VWATLGPRFL PFADAATPDL PLSRLLRLSL FQVSVGMSLV LLVGTLNRVM 
IVELHVPASI VGVMISLPLI FAPFRALIGF RSDIHSSVLG WKRVPFLYKG TMVQFGGLAI
LPFALLVLSG GEEARNAPAW IGQAGSALAF LLIGAGLHTT QTVGLALATD LASPESRPKV
VGLMYVMLLF GMIASALIFG ALLADFSTGR LIQVIQGAAV VTIVLNAVAV WKQEARSRPG
GKPAAAAQRQ PSFRETWQVF IQGDNAIRRL IAVGLGTMAF SMEDVLLEPY GGQILHLSVG
DTTKLTAALA IGGLFGFGLA SRILSRGADP FRMAGFGALI GIPAFAAVIA ADPLDSALLF
GLGTALIGFG AGLFGHGTLT ATMNCAPKHQ AGLALGAWGA VQASAAGVAI ALGGILRDLV
AAIAPNHVLG AASGYDFVYG LEIVLLFATL VTMVPLIRRV GVQAGAEQSP DLRPFSRLET
KTE