| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3770 |
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| Symbol | |
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| ID | 3969363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4190189 |
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| End bp | 4190923 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637926880 |
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| Product | nickel-dependent hydrogenase b-type cytochrome subunit |
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| Protein accession | YP_533624 |
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| Protein GI | 90425254 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
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| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.52768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCAGA TCGAGCGGGT TCATGGCGCC CTCGACGCCC GCGGCGAACG CGCCAAGTCG
TTGCAGACCG TCTATGTCTA CGAAGCGCCG GTCCGGCTCT GGCACTGGGT CAACGCGCTG
TTGATCGTGA CCTTGTGCAT CACCGGCTAT CTGATCGGCT CGCCGCTGCC GTCGGTGTCC
GGCGAGGCCT CGGCGAGCTT CCAGATGGGC TATATCCGCT TCGTGCATTT CGCCGCCGGG
CAGTCGCTGA TCGTGTTCTT CCTGCTGCGG CTATATTGGG CATTCGTCGG CAACCGCAAT
TCGCGGCAGA TCTTCTATCT GCCGCTGCAC AACCGCACCT GGTGGTGGGG CATCTTCTAT
GAGTTGAAAT GGTACTTCTT CATGGTCAAG GACCCGAAGA AGTATATCGG CCACAACCCC
TTGGCGCATG TGGCGATGTT CTCCTTCATG GTGTTCCTGC TGTTCATGAT GGCGAGCGGC
ATGGCGCTGT ATTCCGAAGG CCAGGGCATC GACAGCTGGC AATACAAGCT GTTCGGCTTC
ATGTTCGCGA TCTTCCCGAA CAGCCAGGAT CTGCACACCT GGCATCACCT CGGGATGTGG
GCGATCGTGG TGTTCGTCGT CGTGCATATC TACGCCGCGG TGCGCGAGGA TATCCTCAGC
CGCCAGAGCA TGATCTCGTC GATGATCTCC GGCGAGCGGC TGTTCCGCGA CGACATCGAC
GACTTTCCGC GATGA
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| Protein sequence | MTQIERVHGA LDARGERAKS LQTVYVYEAP VRLWHWVNAL LIVTLCITGY LIGSPLPSVS
GEASASFQMG YIRFVHFAAG QSLIVFFLLR LYWAFVGNRN SRQIFYLPLH NRTWWWGIFY
ELKWYFFMVK DPKKYIGHNP LAHVAMFSFM VFLLFMMASG MALYSEGQGI DSWQYKLFGF
MFAIFPNSQD LHTWHHLGMW AIVVFVVVHI YAAVREDILS RQSMISSMIS GERLFRDDID
DFPR
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