| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3769 |
|---|
| Symbol | |
|---|
| ID | 3969362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4189563 |
|---|
| End bp | 4190192 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637926879 |
|---|
| Product | hydrogenase expression/formation protein |
|---|
| Protein accession | YP_533623 |
|---|
| Protein GI | 90425253 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.645157 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGA TGATCAGCAA CGATAGCAAC GGGACGCGAC CGCTCCGCGC GCTGGTGCTC
GGCATCGGCA ACATCCTGTG GGCCGACGAG GGGTTTGGCG TGCGCGCGGT GGAGGAATTC
CACCAGCGCC ACGTCTGCCC CGAGAGCGTC ACGGTGATGG ACGGTGGCAC CCAAGGGCTC
TACCTCGTGC AATACGTCAA CGAGGCCGAC CGGCTGATCG TGTTCGACGC GGTCGATTAC
GGAATGGAGC CCGGTACGTT GAAACTGGTG CGCGACGACG AGGTGCCGAA ATTCACCGGC
ATCAAGAAGA TGAGCCTGCA CCAGACCGGC TTTCAGGAGG TGCTGAGCGC CGCCGATCTG
CTCGGCCATG TGCCGGCCGA GATGCTCTTG ATCGGCTGCC AGCCGCAGGA TCTGGAGAAT
TGGGGCGGCC CCTTGACCGC GCCGGTGCGC GGCCAGATCG ATGCTGCGGT CGACGCCGCG
GTGGCGGCGC TGGCCGACTG GGGCGTTCAC GTATCGCCGC GCCAAACGCC GCTCGCGCCC
GGCGACCGGT TGCTCGAGGG CGCGATCGAT TTCGAAAATT ACGAGCGCTG CCCGACCGCG
CGGGCGCTGC TCGCCGCGCG TGACGCGTGA
|
|---|
| Protein sequence | MSAMISNDSN GTRPLRALVL GIGNILWADE GFGVRAVEEF HQRHVCPESV TVMDGGTQGL
YLVQYVNEAD RLIVFDAVDY GMEPGTLKLV RDDEVPKFTG IKKMSLHQTG FQEVLSAADL
LGHVPAEMLL IGCQPQDLEN WGGPLTAPVR GQIDAAVDAA VAALADWGVH VSPRQTPLAP
GDRLLEGAID FENYERCPTA RALLAARDA
|
|---|
| |