| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3634 |
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| Symbol | |
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| ID | 3970649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4040942 |
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| End bp | 4042639 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637926742 |
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| Product | major facilitator transporter |
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| Protein accession | YP_533488 |
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| Protein GI | 90425118 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins
[COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.836817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0365069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAATG CCCCCGCCGG CGACGTCGGT TCGAGTTTCT TTCGCCAGCC CCGCGCGGTC
TGGGCCACCG CCTTCGCCGC GGTGGTCGGC TTCATGGGGA TCGGCCTGGT CGATCCGATC
CTGACCTCGA TCGCCGAGGG GCTGCAGGCC ACGCCGAGCC AAGTGTCGCT GCTGTTCACC
AGCTATTTCG CGGTGACCTC GGTGATGATG CTGGCGACTG GCTTCGTCTC CAGCCGGATC
GGCGGGCGGC GGACGCTGCT GCTCGGCGCG GCGCTGATCG CCTGCTTCGC TGCACTCGCC
GGCACGTCGC ATTCGGTCAC CGAACTGGTG CTGTATCGGG CCGGCTGGGG GCTCGGCAAC
GCGTTCTTCG TCGCCACCGC GCTGTCGGTG ATCGTGGCGG CGGCGAGCGG CGGCACCGCC
ACCGCGATTC TGTTGTATGA GGCGGCGCTC GGGCTCGGCA TTTCGGTCGG CCCGCTGCTC
GGCGCAGCCC TTGGTAACCT GTCGTGGCGC TATCCGTTTT TCGGCACCGC GGCGCTGATG
ACCATCGGCT TCGTAGCGAT TGCGTTGTTT CTCGAGGTGC AGCCCAAGGC GGCGCGGAAA
ACCAGTCTGG TCGATCCGAT CCGCGCGCTC GGCCATCGCG GGCTGTTGTC GGTGGCGGGC
AGCGCGTTCT TCTACAATTA CGCGTTCTTC ACCGTGCTGG CGTTCGTGCC CTTCGTGCTG
CAGGCCTCGG CGCACACCGT CGGGCTGATC TTCTTCGGCT GGGGACTGGC GCTGGCGGTG
TTCTCGGTGC TGGTGGCGCC GCGGCTGCAG ATCCTGTTCA GCGCGCTGAC GCTCGGCGTC
GGCAATCTGC TGGCGCTGGC GGTGCTGCTC CTCGGCATGG CCTTCGGCTC GGTGCCGATC
ATCGTCGCCG CGGTGGTGCT GTCCGGCGCG GTGATGGGCA TCAACAACAC CGTGTTCACC
GAAATGGCGC TGGAGATTTC GCCGTTTCCG CGCCCGGTGG CCTCGGCGGC CTATAATTTC
GTGCGCTGGT TCGCCGGCGT GATCGCGCCC TTTGCGGCGC CGAAGATCGC CGAGCATTTC
GGCGCCTCGG CGTCGTTCGT GGTCGCGGCG GTGTCGGCGC TGGCCGCCGC AGGCGTGCTG
CTGGCGATGC GCGGCAATCT CGGTCGGTTC GCCTCAAAGC ATCCCGCCGC GGCGCCCGCG
GAAGCGCCCT CGGCGGCAAC CGGGCCGATC CTGGTCGCGG TCGACGGCAC CGCCAACGAC
CGGGCGATCC TTGCCCGTGC GGCCAAGGTA GCGCTGGCGC TGGGCGCGCC GATCGAGGTG
CTGCATGTCC GCCCGCTGGA ACTGGTCGAG GGTGAAGCCG CCGAGGCGGA AAGTTCCACC
GGCTCCGCCG CCATTCTCGA CCTCGCCTTG GCGCAACTGC GCGACGCCGG CCTGCAGGCC
GCCGGTGCGG TGCGGGAAGA GGTTGCCGCA AGAACGCCAC AAGCGATTCT CGACCATGCC
GCGGATCTCG ACGCCCGGCT GATTGTGCTC GGCGCCCGTC ACCACGACGA CCCGACCGAC
ATCATTCATG GCAGCGTCGC CGATATCATC GGCCGCAGGG CCACTCGCCC AGTGATGTTG
GTGCCGGAGC CGGGCGCGAA TGAGCGGCGA TGCGAGTCCG CGTCGCCCGC CGCAGATCGC
TCGAAAATCG GTATCTGA
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| Protein sequence | MSNAPAGDVG SSFFRQPRAV WATAFAAVVG FMGIGLVDPI LTSIAEGLQA TPSQVSLLFT
SYFAVTSVMM LATGFVSSRI GGRRTLLLGA ALIACFAALA GTSHSVTELV LYRAGWGLGN
AFFVATALSV IVAAASGGTA TAILLYEAAL GLGISVGPLL GAALGNLSWR YPFFGTAALM
TIGFVAIALF LEVQPKAARK TSLVDPIRAL GHRGLLSVAG SAFFYNYAFF TVLAFVPFVL
QASAHTVGLI FFGWGLALAV FSVLVAPRLQ ILFSALTLGV GNLLALAVLL LGMAFGSVPI
IVAAVVLSGA VMGINNTVFT EMALEISPFP RPVASAAYNF VRWFAGVIAP FAAPKIAEHF
GASASFVVAA VSALAAAGVL LAMRGNLGRF ASKHPAAAPA EAPSAATGPI LVAVDGTAND
RAILARAAKV ALALGAPIEV LHVRPLELVE GEAAEAESST GSAAILDLAL AQLRDAGLQA
AGAVREEVAA RTPQAILDHA ADLDARLIVL GARHHDDPTD IIHGSVADII GRRATRPVML
VPEPGANERR CESASPAADR SKIGI
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