| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3613 |
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| Symbol | |
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| ID | 3971640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4017607 |
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| End bp | 4019976 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926720 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_533467 |
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| Protein GI | 90425097 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.187378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACAT CCTTTCACCG GGGCCGGCTG CCCCTTCTGT CGGCGCTGTT CGTGGCGGTC
GAACTGATCG ATCCGACATC GATCGCAGCG GCACAGCAGC CGCCGGGCGG CTCCGATCTC
CCGGCGGTGG TGATCGAGGG ACGCAACGTA AAGCCGCGCG CTGCGGCGAA ACGCGTGGCG
CGCGCGCCAG CGGTTCGCCA GGCGCCTGTG GAGCCGGCGC CAGTCGCCGA CGCGACGCCG
AGGGAAACCG CGCGCGGCCC GGTTCGCGGC ATCGTCGCGC AGCGCAGCAG CACCGGGTCG
AAGACCGACG CCGCGATCCT GGAGACGCCG CAATCGATTT CGGTGGTGAC CAAGGATCAG
ATCGCCGCGC AGGGCGCCCG CAGCGTCGCC GAGGCGCTGC GCTATGAGCC CGGCGTGGTG
TCGGAAAGCC GGGTCGGCGA TCGGTTCGAC AACGTGTTCA TCCGCGGCTT CGGCGGGTTC
GGCGCCAACG CCAACTACCT GCATTTCTGG GATGGACTGC GACTGCCGCG CGGCGTCTCC
TACGCGATGC CCTCGGTCGA TCCTTATCTG CTGGAGCGGG TCGAGATTCT GCGCGGACCG
GCTTCGGTGC TTTACGGTCA GAACAATCTC GGCGGCATGG TCAATCTGAT CAGCAAGAAC
CCCACCGCCA CGCCGCAGGG CGAGGTGATG GCAAGGTTTG GCGATCACAA CCGCTACGAA
GGCGGCTTCG ACGTCTCCGG TCCGCTCACC AAGGATGGCG ATTTGCTGTA TCGGCTGATC
GGGCTCGGCC GCAAGGCCGA CACCGAGGTC AACGACACCA CCACCGAACG CCAGCTGATC
GCGCCGACCA TCACTTGGAG GCCGTCGGTC GACACCACCT GGACGATCCG TGGCAGTTAC
GACCACGATC CTTCCGCCTA TCAGCCGAAC TGGTTGCCGG CGCTCGGCAC GCTGCAGAGC
AATCCCAACG GGCAGATCCC GAAGAACTTC TTCTCCGGCC ATCCCGCTTA TAATGAATAC
GACCGCACCC AGACTTCGGT CGGTTACGAG TTCGAGCATC ATTTCGACGA GATGTGGAGC
GTTCGACAGA ATCTGCGATA CATGGAGGTC TCCAGCGACT TCAAGGCGCT GTCGGTGACC
GGATTCGGCA CCGGTTCGAG CTGCGGCGCC GGCAGCAAGG CCAATCTCTG CCTGGCCCGC
ACCACCACGC ATTACATCGA GCAATTGAAA GCCGCCTCGC TCGACAATCA GGTCGAGGCG
AAATTCGACA CTGGCTGGCT GCACCACACC GTGCTCGCCG GGCTCGACTA TCAGACCTCG
AGCGCCAATG CGCAGTTCGG CAGCGGTACC GCGACCAACA TCAACTATCT CAATCCCAAC
TACGGCACAC TGGCCGGGCC GGCGCTGACC AGCCGAACCG ATCAGGAGCG CAACCAGCTC
GGCGTCTATG CCCAGGACCA GGTTCGGCTC GGCAAGCTTG CCGTGGTGCT CGGCGTCCGC
AACGACTGGG CCGACGCCAG CTCGGAAACG CGAACGCTGG CGAACGGCAA AATCACCAGC
AGCGCCCGGC CGGACGATTC CGCGGCGACC TGGCGCGCTG GCGCGACCTA TCTGTTCGAC
AACGGCTTTG CGCCCTATGC CAGCTATTCG ACCTCATTCG AGCCGACCAT CGGCACCGAT
TACACCGGCG CCGCATTCGT GCCGACCACC GGCGAGCAAT ACGAAGTCGG CGTGAAATAT
CAGCCGGTCG GCCTCAACGG CTTCTTCATG CTGTCGTATT TCGACATCAC CCAGAACAAC
GTGCTGACGC TGGACACCGC GCATCTGGTC TCCGCCAATC CGCTGTGCAC GGCGTCTGGA
ACCAGTTGCC AGATCCAGCA GGGCCAAGTC CGCTCCAAGG GCGTCGAACT CAGCGGCAAG
GCGACGCTAT CGCCCGGCCT CGACCTGGTC GCAGCCTATT CGCACACCGA CATCGAGATC
TCCAAGAGCA CCCAGGTGGT CGGCGGCATC GCGGTGCAGG GCAAGACCCC GGTCGGCGCG
CCGGCGAATA CGGCCTCGCT GTGGCTGGAT TATACGCTGC AGAGCGGCCC GCTGGCCGGC
TTCGGCGGCG GCGGCGGCGT CCGCTATGTC GGTTCGTCAT TCGGCGACAA CATCAACTCG
GCGGCGATGG TGGTGCCGGC CTACACATTG GCCGATCTGC AGCTGCACTA CGATCTTGCC
GGGCTGTCGG TGCAGCTGAA GGGCTGGAAG CTCGCCGTCA ACATGAGCAA CGTGTTCGAC
AAGACCTATG TGTCGGCCTG CGCCTCGGCG ACGCAATGCT TCTATGGCAA CGGCCGCACC
ACGCTCGGCA CGGTCAAGTA CCAATGGTAG
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| Protein sequence | MMTSFHRGRL PLLSALFVAV ELIDPTSIAA AQQPPGGSDL PAVVIEGRNV KPRAAAKRVA
RAPAVRQAPV EPAPVADATP RETARGPVRG IVAQRSSTGS KTDAAILETP QSISVVTKDQ
IAAQGARSVA EALRYEPGVV SESRVGDRFD NVFIRGFGGF GANANYLHFW DGLRLPRGVS
YAMPSVDPYL LERVEILRGP ASVLYGQNNL GGMVNLISKN PTATPQGEVM ARFGDHNRYE
GGFDVSGPLT KDGDLLYRLI GLGRKADTEV NDTTTERQLI APTITWRPSV DTTWTIRGSY
DHDPSAYQPN WLPALGTLQS NPNGQIPKNF FSGHPAYNEY DRTQTSVGYE FEHHFDEMWS
VRQNLRYMEV SSDFKALSVT GFGTGSSCGA GSKANLCLAR TTTHYIEQLK AASLDNQVEA
KFDTGWLHHT VLAGLDYQTS SANAQFGSGT ATNINYLNPN YGTLAGPALT SRTDQERNQL
GVYAQDQVRL GKLAVVLGVR NDWADASSET RTLANGKITS SARPDDSAAT WRAGATYLFD
NGFAPYASYS TSFEPTIGTD YTGAAFVPTT GEQYEVGVKY QPVGLNGFFM LSYFDITQNN
VLTLDTAHLV SANPLCTASG TSCQIQQGQV RSKGVELSGK ATLSPGLDLV AAYSHTDIEI
SKSTQVVGGI AVQGKTPVGA PANTASLWLD YTLQSGPLAG FGGGGGVRYV GSSFGDNINS
AAMVVPAYTL ADLQLHYDLA GLSVQLKGWK LAVNMSNVFD KTYVSACASA TQCFYGNGRT
TLGTVKYQW
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