Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_3611 |
Symbol | |
ID | 3971638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4015554 |
End bp | 4016696 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637926718 |
Product | periplasmic binding protein |
Protein accession | YP_533465 |
Protein GI | 90425095 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.486041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0848378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGTG TTCGCGGGCG CGATGCGGCG GCAAGATCGA TCGCGGCGCT GCTGCTGGCC TTCGCCTTGG CGCTCGGCGG GCTGATCGCG CCGGCCCGCG CCGATCAGCC GATCGAGGTC ACCGACGTTA CCGGCCGCAG CGTGACCTTG GCTGGCCCCG CGCGAAAAAT CCTGCTCGCC GAGGGTCGCC AGATCATCGC GCTGTCGCTG ATCCATGCAG CGCCGGTCAG CGTGCTGGCC GGCTGGCTCG GGGATTTTCG CAAGAATGAC CCGGAGACCT ACGCGTTGTA TCGCGAGACA TTCCCGCAGA TCGACGCGGT GCCGGTGCTC GGGCTCGGCA ATGACGGGAC GTTTTCGGTC GAGCAGGCGA TCGCGATGCA GCCGGATCTC GCGGTGCTCG GCGTCAGCTT TGCGCCGGGC GGGCGCGCCA ACGACGTGGC GCGGCAGTTG GAAGCGGCGG GCATCCCAGT GGTGTTCACC GATTTCTTCG TCGCGCCGTT CGAGAACACG CTGCGCAGTC TGCGGATTCT CGGCCGCGTC ACCGGCCGGG GCGCGCAGGC CGAATCCTAC GCCGCGTTCT ATCAGGCCCA TATGGATCGG ATCGCCGCGC TATTGGCGCA CAGCGCCGCG CCGCGGCCGA GCATTCTAGT GGAAACCCAC GCCGGGATTT CCGATTGCTG CCACGCGCCG GGAGCCGGCA ATATTGGGCG GTTCATTGCG TTTGCCGGCG GCGACAGCAT CTCGGCCAGC GTGTCGTCGG CGCCGAGCGC GCAATTGGGA CTGGAATATG TGATCGCGCA AAATCCGCAG ATCTATGTCG GCACCGGCGG CGCCCATCTG AAATCCTCTG GCGGGCTGGT GATCGGTCCG GGCTTTGACG CCGCCACGAT CCGCGAACGG CTGGCCGCGG TGGTGGCGCG GCCGGGCTTT GCCGAACTGC GCGCGGTGCG TGAGCGCCGG GTCCACGGGC TGTTTCACAA CATGCTGTCG ACGCCGCTCA ATCTGCTGGT CACCGAGGCG CTCGCCAAAT GGATCAATCC GGAGCTGATG CAGGAGATCG ATCCCGATGC GACGATGGCG GAGATCAATG CGCGCTTTCT GGCGGTGCCG ATGCGCGGAA CCTATTGGAT CGATCTGAAG TGA
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Protein sequence | MMRVRGRDAA ARSIAALLLA FALALGGLIA PARADQPIEV TDVTGRSVTL AGPARKILLA EGRQIIALSL IHAAPVSVLA GWLGDFRKND PETYALYRET FPQIDAVPVL GLGNDGTFSV EQAIAMQPDL AVLGVSFAPG GRANDVARQL EAAGIPVVFT DFFVAPFENT LRSLRILGRV TGRGAQAESY AAFYQAHMDR IAALLAHSAA PRPSILVETH AGISDCCHAP GAGNIGRFIA FAGGDSISAS VSSAPSAQLG LEYVIAQNPQ IYVGTGGAHL KSSGGLVIGP GFDAATIRER LAAVVARPGF AELRAVRERR VHGLFHNMLS TPLNLLVTEA LAKWINPELM QEIDPDATMA EINARFLAVP MRGTYWIDLK
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