Gene RPC_3547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3547 
Symbol 
ID3973954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3946334 
End bp3946798 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content60% 
IMG OID637926658 
ProductCopG-like DNA-binding 
Protein accessionYP_533405 
Protein GI90425035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.715677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATCA AGACCCGCAT GAACGTCTAC TTCGAGCCGG CGCTGCTCAA ACAGGTCGAG 
GTGCTGGCGC TGCGGCGTAA CGTTTCCAAA TCCGCAGTGA TCGAGGCCGC CGTGGCGTCC
TTTCTGTCGG AAGATTCCGC GGAGCGGTCA GAAGCTGTCT TGGCGCGCCG CATGGACCGG
CTTGGCCGCC AGATCGACAT TATCGACGAG GATATCGCCA TTCTCGGCGA AACCGTCTCA
TTGTTCATCC GGTTCTGGCT GACGATCACG CCGCCCTTGC CCGACAGTGC GCAGGTATCG
GCCCGCGCCA AGGGCTTGGA GCGGTTCGAA GGATTCGTTC AGGCGCTCGG ACGCCGCTTG
GCAAGGGGTG ATCGGTTCAT CAAGGAGTTA TCACGTGACA TCCCACCAGC GCATGCAAGC
GAGGCCCTTT CAGAAATTGG CGACAAGAAT AACGGACTCG TTTGA
 
Protein sequence
MPIKTRMNVY FEPALLKQVE VLALRRNVSK SAVIEAAVAS FLSEDSAERS EAVLARRMDR 
LGRQIDIIDE DIAILGETVS LFIRFWLTIT PPLPDSAQVS ARAKGLERFE GFVQALGRRL
ARGDRFIKEL SRDIPPAHAS EALSEIGDKN NGLV