| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3500 |
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| Symbol | |
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| ID | 3973192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3889518 |
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| End bp | 3890195 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637926612 |
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| Product | hypothetical protein |
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| Protein accession | YP_533359 |
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| Protein GI | 90424989 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2364] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.850537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACTTTC TAACCATGCC CGATCGGGGG ACCCGACTTC CCAGCTTTAG TCAACTCTTC
ATCTATCTCG TCGGGTGTGT GGTCTTTGCC GCCGGCGCGT TCATGTTCAT CTATTCGAAT
CTTGGTACTG ATCCGCTCGA CGTGTTCTCG CTTGGGCTCC AGCGATACCT GCCGATTACG
ATCGGTATCG CTCAGACGCT CATCGCGGTG ATCTGCTTAG GCATCGTGGC ACTGTGGACG
CGCCGGCGAC CGCTGCTTTC ACCGATCTTC ACGTTCTTCT TCTGCGGCAG CTTGATCGAC
CTTTTGAGAT TGTTTCAGCC GGCGGACCTT CTCGGCATGA GTTCCATGTC CGTGATGCTG
TTCGGCACGC TGCTCTGCGC CTATGGCTCA TCGCTCATCA TCATGAGTGG CTTTGGCATC
CGTGGGATGG ACCTGCTCGC GATCGAGATG ACCAAGCATT GGCGCCTGCC ATTCTGGTCG
ACCAAGGGCG CACTGGAGGC GGTCTTGCTG ATTTCCGGCT GGCTGATGGG CGGCCCGGTC
GGGGTCGGGA CCCTGTCTTT TCTGATCGGC GTGAATGCCT TCATCCAACC GATGATGTGG
GCCAACGCCC GAATCCTGCG TCTCAGGAAT TTCGGTCTGC CGCCACGCGA AGCAATGGCG
GAGACCCTGC CGATCTGA
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| Protein sequence | MYFLTMPDRG TRLPSFSQLF IYLVGCVVFA AGAFMFIYSN LGTDPLDVFS LGLQRYLPIT
IGIAQTLIAV ICLGIVALWT RRRPLLSPIF TFFFCGSLID LLRLFQPADL LGMSSMSVML
FGTLLCAYGS SLIIMSGFGI RGMDLLAIEM TKHWRLPFWS TKGALEAVLL ISGWLMGGPV
GVGTLSFLIG VNAFIQPMMW ANARILRLRN FGLPPREAMA ETLPI
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