| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3494 |
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| Symbol | |
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| ID | 3972861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3882123 |
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| End bp | 3883397 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637926606 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_533353 |
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| Protein GI | 90424983 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.782932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATG CGGATTTGTT GACGCGCAGA CAAGCGGCGG TGGTGCGGGG CGTCAGCCAC
GCCACCCCGA TTTTTGCGGA GCGGGCGCTG AATAGCGAAG TGTGGGACGT CGAAGGCAAG
CGCTACGTCG ACTTCGCCGG CGGCATCGCG GTGCTCAATA CCGGCCACTG CCATCCGCAC
ATCGTGCAGG CGATCCGCGA CCAACTCGAT CGTTTCACGC ACACCTGCTT CCAGGTGCTG
CCATATGAAT CCTACGTCGA GCTCGCCGAG CGGCTGAACG CCTTGGCGCC GATCAACGGG
CCGTTGAAAT CCATTTTGCT GAGCACCGGC GCCGAAGCTA CCGAGAACGC CGTCAAGATA
GCACGCGCCG CCACCGGTCG TAGCGGCGTA ATCGCGTTCA CCGGCAGCTT CCACGGCCGC
ACCGCCTTTG CCTCGGCGAT GACCGGCAAG GTCATTCCCT ACAAGAAGCT GTTGGGACCG
CCGTTGCCCG GCGTCTGGCA CGTGCCGTTT CCGGCGGCGG GCGGCGACGT CAGCGTCGAC
GACGCGCTGC GCGCCATCGC CTTCATCTTC AAGGCCGACA TCGACGCCTC GCAAGTCGCG
GCGATCATCA TCGAACCGGT GCAGGGCGAG GGCGGCTTTC ATCAGGCGCC CGACGAACTG
ATGCGCGGGC TGCGCCGGAT CTGCGACGAG AACGGCATCG TGCTGATCGC CGACGAGGTG
CAGACCGGAT ACGGCCGCAC CGGCAAGATG TTCGCGATGG AGCATTTCGA CGTGCAGGCC
GACATCGTCT GCGTGGCGAA GAGCCTCGCC GGCGGCATGC CGTTGTCCGC GGTGATCGGC
CGCGCGGCGA TCATGGACGC CGCCGAACCG GGCGGGCTCG GCGGGACCTA TGCGGGCCAT
CCGTTGGCCT GCGCCGCGGC GCTCGCGGTG CTCGATGTGT TTGAAAAGGA AAATCTGGTG
GCGCGCGCCA ATCAGATCGG CGAGCGGCTG CGCGCCGGCA TCGACCGCTT CGCGCTGTCC
AACACCCTGC TGCCGACCTC GGCGGCGCGC GGGCCGGGCG CCATGGTGGC GTTCGACATT
CTCAAACACC GCGACAGCAA CGAGCCGGAT GCCGCGGCGA CCAAGCGCGT CACCAAGCTC
GCCTATGAGA ACGGCTTGAT CCTGCTGTCC TGCGGCACCA CCGCCAACAC CATTCGCATC
CTGGTGCCGC TGACCGCATC GGACGCCATC ATCGACGAGG GGCTGGCGAT TCTGGAACGC
TGTCTCGCCG CTTAA
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| Protein sequence | MTNADLLTRR QAAVVRGVSH ATPIFAERAL NSEVWDVEGK RYVDFAGGIA VLNTGHCHPH
IVQAIRDQLD RFTHTCFQVL PYESYVELAE RLNALAPING PLKSILLSTG AEATENAVKI
ARAATGRSGV IAFTGSFHGR TAFASAMTGK VIPYKKLLGP PLPGVWHVPF PAAGGDVSVD
DALRAIAFIF KADIDASQVA AIIIEPVQGE GGFHQAPDEL MRGLRRICDE NGIVLIADEV
QTGYGRTGKM FAMEHFDVQA DIVCVAKSLA GGMPLSAVIG RAAIMDAAEP GGLGGTYAGH
PLACAAALAV LDVFEKENLV ARANQIGERL RAGIDRFALS NTLLPTSAAR GPGAMVAFDI
LKHRDSNEPD AAATKRVTKL AYENGLILLS CGTTANTIRI LVPLTASDAI IDEGLAILER
CLAA
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