| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3493 |
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| Symbol | |
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| ID | 3972860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3880600 |
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| End bp | 3882051 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637926605 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_533352 |
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| Protein GI | 90424982 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.348419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGC CGAGTGATCC GGGCCTGTTG GCCGAGCGCT GCCTGATCGG CGGCGAGTGG
AGCGGTGAGC CGGTCGACGC CGTGTTCAAC CCGGCCACCG GCGAACGCAT CGGCGCGGTG
CCGCGGTTCG GCGCCGACGA AGCCGAGGAT GCGGTGCATG CCGCGGGCGT GGCGTTCCGG
CAATGGTCGA AGCTGCTGGC CAAGCAACGC GCCGCACTGC TGCGCGTCTG GTTCGACCTG
ATCATCGCGC ACCGCGACGA GCTGGCGCGG CTGTTGACCG CGGAGCAGGG CAAGCCATTG
GCCGAAGCGC TGGGCGAAAT CGATTACGCC GCGTCGTTCG TGGAGTTCTA CGCCGAGGAG
GCGCGGCGCA TCTACGGTGA AACCATCCCG TCGCACCGCG CCGATTCCCG CACGCTGGTG
ATCCGGCAGC CGGTCGGCGT GGTCGCCGCG ATCACGCCGT GGAATTTTCC CGCCGCGATG
ATCACCCGCA AGGTCGCGCC GGCGCTCGCC GCCGGCTGCA CCGTGGTGGT CAAGCCGGCG
CCGGAGACGC CGTTCACCGC GCTGGCGCTC GGCGTGCTGG CGCAGCGCGC CGGAATTCCG
CCGGGCGTGA TCAACATCAT CACCGGCGAC GCGCCGGCGA TCGGCCGTGT GTTGACCGAG
CATCCTTTGG TGCGCGCGAT CAGCTTCACC GGCTCGACCG CGGTCGGCAA GATTTTGATG
CGGCAGGCCG CGTCCACCGT GAAGCGAGTC GGGCTCGAAC TCGGCGGCAA CGCGCCGTTC
ATCGTGTTCG ACGATGCCGA TCTCGACGCC GCGGTCGAAG GCGTGCTGGT GTCGAAGTTT
CGCAACATGG GACAGACCTG CGTTTGCGCC AATCGAATCT ACGCGCAGGA CAGCATCTAC
GACGCCTTCG TGCAGAAATT GACCGAAAAG GTCGCGGCGC TGAAGGTTGG CAACGGCCTC
GAGGCCGGCG TCACCCAGGG TCCGCTGATC AACAAGCAGG CGGTCGACAA GGTCGAGCGG
CACATCGCCA ATGCCACCGC CAACGGCGCC AAGGTGCTGT TCGGCGGCAA GCGGCACGCA
CTCGGCCGCA CCTTCTTCGA GCCGACGGTT CTATCGGGCG TCACCACCGA CATGGTGATC
ACCCACGAGG AAACCTTCGG CCCGGTGGCG CCGGTGTATC GCTTCAGCGA TGAGGCCGAC
GTGATCGCCA AGGCCAACGC CTCGCCGTTC GGGCTGGCGG CCTATTTCTA CGCCCGCGAT
CTCGGCCGCG TATTCCGGGT CGCCGAGGCG CTGGAGGCCG GCATGGTCGG CGTCAACTCG
GCGCTGCTCG GCGCCGACGT GGTGCCGTTC GGCGGCGTCA AGGAGTCGGG GCTGGGCCGC
GAAGGCTCGC ATCACGGCAT CGAGGAATAT GTCGACATCA AATACATCAT GCTCGGCGGG
CTTGACCGCT GA
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| Protein sequence | MLKPSDPGLL AERCLIGGEW SGEPVDAVFN PATGERIGAV PRFGADEAED AVHAAGVAFR
QWSKLLAKQR AALLRVWFDL IIAHRDELAR LLTAEQGKPL AEALGEIDYA ASFVEFYAEE
ARRIYGETIP SHRADSRTLV IRQPVGVVAA ITPWNFPAAM ITRKVAPALA AGCTVVVKPA
PETPFTALAL GVLAQRAGIP PGVINIITGD APAIGRVLTE HPLVRAISFT GSTAVGKILM
RQAASTVKRV GLELGGNAPF IVFDDADLDA AVEGVLVSKF RNMGQTCVCA NRIYAQDSIY
DAFVQKLTEK VAALKVGNGL EAGVTQGPLI NKQAVDKVER HIANATANGA KVLFGGKRHA
LGRTFFEPTV LSGVTTDMVI THEETFGPVA PVYRFSDEAD VIAKANASPF GLAAYFYARD
LGRVFRVAEA LEAGMVGVNS ALLGADVVPF GGVKESGLGR EGSHHGIEEY VDIKYIMLGG
LDR
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