| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3482 |
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| Symbol | |
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| ID | 3972849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3867696 |
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| End bp | 3868934 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926594 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_533341 |
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| Protein GI | 90424971 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.468948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCA CCATGTCCGA CCGCCAGCGC GAATGGCTCG ATCGCGTCAA CGCTTTCATG
GACGCGCATG TGCGGCCGGC GGTTCCGATC TATCGGGAAC AGGACGAAGC CGGCGAGCGC
TGGAAGGTGA TCCCGATCCT CGAGGATCTG AAGAAGAAGG CCAAGGCCGA GGGGCTGTGG
AATTTGTTCA TGCCGCCGTC GTCGCACGAA GACGACGAAT TTCGCGGCGC AGGCCTCAGC
AATCTGGAAT ACGCGTTGCT TGCCGAACAG ATGGGCCGCA TCGGCTTTGC CTCCGAAGTG
TTCAACTGCT CGGCGCCGGA CACCGGCAAC ATGGAAGTGC TGATGCGCTA CGGCACCAAG
GAGCACAAGC GCAAATGGCT GCGGCCATTG ATGGACGGCG AGATTCGCTC CGCCTTCCTG
ATGACCGAGC CGGCGGTGGC CTCGTCGGAC GCCACCAACA TCGAGACATC GATCGTGCGC
GACGGCGACG ACTACGTGAT CAACGGCCGC AAATGGTGGT CGTCCGGGGT CGGCGATCCG
CGCTGCCAAG TGCTGATCGT GATGGGCAAG ACTGATCCGT CGGCGGCGCG GCATCAACAG
CAATCGCAGA TTCTGGTGCC GCGTGACGCC AAGGGCATCA CCGTGGAAAA GATGCTGCCG
GTGTTCGGCT TCGACGACGC ACCGCACGGC CACGGCCAGG TGCTGCTGGA CAACGTCCGC
GTTCCGGCCG GCAACATCCT GCTCGGCGAG GGCAGGGGCT TCGAGATCGC GCAGGGCCGG
CTCGGCCCCG GCCGCATCCA TCATTGCATG CGCACCATCG GCAAGGCCGA GGAGGCGCTG
GAGAAGATGG TGAAGCGGCT GTCGTCGCGC ACCGCGTTCG GCAAGAAGAT CATCGAATTC
TCGGTGTGGG AGCAGCGCAT CGCCGAGGCC CGCACCGACA TCGAGATGAA CCGGCTATTG
TGCCTGAAGG CCGCCGACAT GATGGACAAG GTCGGCAACA AGACCGCGCA GCTCGAAATC
GCGATGATCA AGGTGGCGGC GCCGAACATG GCGCTGCGCA TCATCGACAA CGCGATCCAG
GCGTTCGGCG GTGCCGGCGT TTCCGACGAT GCCGGGCTCG CCAAGGACTA CGCCCATATG
CGCACCATGC GTCTCGCCGA CGGCCCCGAC GAGGTGCACA ACCGCGCCAT CGCCCGGCTG
GAATTGCGCA AATACGCCAA CGCCGCGGCC AAGCACTAA
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| Protein sequence | MDFTMSDRQR EWLDRVNAFM DAHVRPAVPI YREQDEAGER WKVIPILEDL KKKAKAEGLW
NLFMPPSSHE DDEFRGAGLS NLEYALLAEQ MGRIGFASEV FNCSAPDTGN MEVLMRYGTK
EHKRKWLRPL MDGEIRSAFL MTEPAVASSD ATNIETSIVR DGDDYVINGR KWWSSGVGDP
RCQVLIVMGK TDPSAARHQQ QSQILVPRDA KGITVEKMLP VFGFDDAPHG HGQVLLDNVR
VPAGNILLGE GRGFEIAQGR LGPGRIHHCM RTIGKAEEAL EKMVKRLSSR TAFGKKIIEF
SVWEQRIAEA RTDIEMNRLL CLKAADMMDK VGNKTAQLEI AMIKVAAPNM ALRIIDNAIQ
AFGGAGVSDD AGLAKDYAHM RTMRLADGPD EVHNRAIARL ELRKYANAAA KH
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