| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3423 |
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| Symbol | rplQ |
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| ID | 3970178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3810124 |
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| End bp | 3810531 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637926534 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_533282 |
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| Protein GI | 90424912 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.108892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCACG GCAAGGTTCA TCGCAAGCTC AACCGCACCG CCGAACATCG CAAGGCGATG
TTTGCCAACA TGTGCGCGTC GCTGATCAAG CACGAGCAGA TCGTCACCAC GCTGCCGAAG
GCCAAGGAGC TCCGCCCGAT CGTGGAGAAG CTGGTCACCC TCGGCAAGAA GGGCGGCCTC
GCGCTGCGCC GCCAGGCGAT CAGCGAGATG AAGGATCAGG ATCAGGTCCG CAAGCTGTTC
GACGTGCTGG CCAAGCGCTA CGCCGACCGT CAGGGCGGCT ACACCCGCAT CATCAAGGCC
GGCTTCCGCT ACGGCGACAA CGCGCCGATG GCGGTGATCG AATTCGTCGA CCGCGACGAA
AACGCCAAGG GCCTCGACTC CGGCCAGGCC GAAGAGAAGG CCGCGTAA
|
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| Protein sequence | MRHGKVHRKL NRTAEHRKAM FANMCASLIK HEQIVTTLPK AKELRPIVEK LVTLGKKGGL
ALRRQAISEM KDQDQVRKLF DVLAKRYADR QGGYTRIIKA GFRYGDNAPM AVIEFVDRDE
NAKGLDSGQA EEKAA
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